RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 STMN4Q9H169 189 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 REEP4Q9H6H4 257 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 TRIM45Q9H8W5 580 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 FOLH1BQ9HBA9 442 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 TNFRSF19Q9NS68 423 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 NKIRAS1Q9NYS0 192 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 MAT2BQ9NZL9 334 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 MED11Q9P086 117 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 CES1P1Q9UKY3 287 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 B9D1Q9UPM9 204 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ZNF835Q9Y2P0 537 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 DSPP15924 2871 aaKnown RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 ANKRD11Q6UB99 2663 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 DMXL2Q8TDJ6 3036 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 GOLGA8QA0A0J9YX86 632 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 GOLGA8OA6NCC3 632 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 EEF1E1-BLOC1S5C9J1V9 151 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 GOLGA8NF8WBI6 632 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 C19orf84I3L1E1 186 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 ACOX3O15254 700 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 EEF1E1O43324 174 aaKnown RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 EMC8O43402 210 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 LANCL1O43813 399 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 HCN1O60741 890 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 UGT2B11O75310 529 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 SERF1AO75920 110 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 UTS2O95399 124 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 LY6G6DO95868 133 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 BPGMP07738 259 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 HSMCR30P0CW71 290 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 RPA2P15927 270 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 IL2RGP31785 369 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 SOX6P35712 828 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 ACAA2P42765 397 aaKnown RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 CCT3P49368 545 aaKnown RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 RPL14P50914 215 aaKnown RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 RPL8P62917 257 aaKnown RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 TLE4Q04727 773 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 PJVKQ0ZLH3 352 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 EXOC3L2Q2M3D2 409 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 VPS26BQ4G0F5 336 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 RAET1LQ5VY80 246 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 NCR3LG1Q68D85 454 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 FAHD2BQ6P2I3 314 aaPredicted RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 KCNIP4Q6PIL6 250 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 CLEC18BQ6UXF7 455 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 Q6ZPB1 254 aaPredicted RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 ZNF621Q6ZSS3 439 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 TMEM179BQ7Z7N9 219 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 CROCCP2Q86T23 111 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 LUZP2Q86TE4 346 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 PLCZ1Q86YW0 608 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 GRAMD2AQ8IUY3 354 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 COX18Q8N8Q8 333 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 CNEP1R1Q8N9A8 125 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 FAM83FQ8NEG4 500 aaPredicted RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 OR7G2Q8NG99 324 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 OR13F1Q8NGS4 319 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 OR5AK3PQ8NH89 298 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 LILRB4Q8NHJ6 448 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 NEIL3Q8TAT5 605 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 GTSF1Q8WW33 167 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 TCTEX1D2Q8WW35 142 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 DYDC1Q8WWB3 177 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 RMND5BQ96G75 393 aaPredicted RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 FAHD2AQ96GK7 314 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 SH3YL1Q96HL8 342 aaPredicted RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 ZNF681Q96N22 645 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 AMDHD1Q96NU7 426 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 ZIM3Q96PE6 472 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 ZBTB18Q99592 522 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 UGT2B28Q9BY64 529 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 DPY30Q9C005 99 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 PPDPFQ9H3Y8 114 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 GLIPR2Q9H4G4 154 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 GIN1Q9NXP7 522 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 SPRR3Q9UBC9 169 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 MRPS7Q9Y2R9 242 aaKnown RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 L3MBTL1Q9Y468 752 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 DNAJC15Q9Y5T4 150 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 CHCHD2Q9Y6H1 151 aaPredicted RBP3.14□□□□□ -1.91
HTT-210ENST00000512909 PIKFYVEQ9Y2I7 2098 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 PCM1Q15154 2024 aa3.14□□□□□ -1.91
HTT-210ENST00000512909 NBEAQ8NFP9 2946 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ITPR1Q14643 2758 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 IGSF10Q6WRI0 2623 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 SPTBP11277 2137 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 PTPRQQ9UMZ3 2332 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CHD6Q8TD26 2715 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 IGHV3-35A0A0C4DH35 117 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 FAM168BA1KXE4 195 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 OR6C70A6NIJ9 312 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 NPIPA7E9PJI5 369 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 PPIAL4DF5H284 164 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 H3BNH8 94 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 UPK1AO00322 258 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 LSM1O15116 133 aaKnown RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 BIRC5O15392 142 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 BCAS1O75363 584 aaPredicted RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 ZNF254O75437 659 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms