RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 SULT1C2O00338 296 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 CHRM2P08172 466 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 CCL2P13500 99 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 RAC2P15153 192 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 CDK2P24941 298 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 PTGFRP43088 359 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 CA7P43166 264 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 SSBP1Q04837 148 aaKnown RBP13.12□□□□□ -0.31
SCLT1-209ENST00000511426 SNX29P2Q8IUI4 249 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 OR56B2PQ8NGI1 322 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 TRIM63Q969Q1 353 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 COX4I2Q96KJ9 171 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 S100A13Q99584 98 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 C7orf50Q9BRJ6 194 aaKnown RBP13.12□□□□□ -0.31
SCLT1-209ENST00000511426 THAP7Q9BT49 309 aaPredicted RBP13.12□□□□□ -0.31
SCLT1-209ENST00000511426 ANKRD11Q6UB99 2663 aaPredicted RBP13.12□□□□□ -0.31
SCLT1-209ENST00000511426 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 CD300LBA8K4G0 201 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 VSIG8P0DPA2 414 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 ZNF35P13682 527 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 BMP5P22003 454 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 PTH2RP49190 550 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 ATP1B3P54709 279 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 UCP2P55851 309 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 TAS2R20P59543 309 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 AP3S2P59780 193 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 PPP1CBP62140 327 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 ARL6IP1Q15041 203 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 MZT2BQ6NZ67 158 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 C3P1Q6ZMU1 363 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 DNM1P46Q6ZS02 220 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 RFPL4BQ6ZWI9 263 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 ZNF101Q8IZC7 436 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 FAM46BQ96A09 425 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 URM1Q9BTM9 101 aaKnown RBP13.12□□□□□ -0.31
SCLT1-209ENST00000511426 SLC22A4Q9H015 551 aa13.12□□□□□ -0.31
SCLT1-209ENST00000511426 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
SCLT1-209ENST00000511426 ANKRD30BLA7E2S9 258 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 EEF1E1-BLOC1S5C9J1V9 151 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 EEF1E1O43324 174 aaKnown RBP13.11□□□□□ -0.31
SCLT1-209ENST00000511426 ECDO95905 644 aaPredicted RBP13.11□□□□□ -0.31
SCLT1-209ENST00000511426 NGFP01138 241 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 MTCP1P56278 107 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 GLIPR1L1Q6UWM5 242 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 ZDHHC23Q8IYP9 409 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 PAQR4Q8N4S7 273 aaPredicted RBP13.11□□□□□ -0.31
SCLT1-209ENST00000511426 ZSCAN4Q8NAM6 433 aaPredicted RBP13.11□□□□□ -0.31
SCLT1-209ENST00000511426 PXT1Q8NFP0 134 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 MRPS24Q96EL2 167 aaKnown RBP13.11□□□□□ -0.31
SCLT1-209ENST00000511426 C1orf147Q96MC9 270 aaPredicted RBP13.11□□□□□ -0.31
SCLT1-209ENST00000511426 ATG5Q9H1Y0 275 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 SCPEP1Q9HB40 452 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 GPR173Q9NS66 373 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 PTTG3PQ9NZH4 202 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 IL36GQ9NZH8 169 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 TBC1D24Q9ULP9 559 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 MRPS7Q9Y2R9 242 aaKnown RBP13.11□□□□□ -0.31
SCLT1-209ENST00000511426 MEMO1Q9Y316 297 aa13.11□□□□□ -0.31
SCLT1-209ENST00000511426 OR5B21A6NL26 309 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 CECR9P0C854 216 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 PPP3CBP16298 524 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 OR3A4PP47883 348 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 ZP1P60852 638 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 CEACAM21Q3KPI0 293 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 PLCXD3Q63HM9 321 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 ASCL4Q6XD76 172 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 OR5A2Q8NGI9 324 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 FCAMRQ8WWV6 532 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 YIPF5Q969M3 257 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 S100PBPQ96BU1 408 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 ZC3HAV1LQ96H79 300 aaKnown RBP13.1□□□□□ -0.31
SCLT1-209ENST00000511426 PAPOLGQ9BWT3 736 aaKnown RBP13.1□□□□□ -0.31
SCLT1-209ENST00000511426 TMEM59Q9BXS4 323 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 TAS2R8Q9NYW2 309 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 RBMX2Q9Y388 322 aaKnown RBP13.1□□□□□ -0.31
SCLT1-209ENST00000511426 CACNA1AO00555 2505 aa13.1□□□□□ -0.31
SCLT1-209ENST00000511426 CENPXA8MT69 81 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 CELA3BP08861 270 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 GSTT2BP0CG30 244 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 EFNB2P52799 333 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 UNC119Q13432 240 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 DYRK1AQ13627 763 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 PPA1Q15181 289 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 TSC22D1Q15714 1073 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 SAXO1Q8IYX7 474 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 TNFAIP8L1Q8WVP5 186 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 PIGCQ92535 297 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 HIST1H2AAQ96QV6 131 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 ACTR6Q9GZN1 396 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 ZNF107Q9UII5 783 aaPredicted RBP13.09□□□□□ -0.31
SCLT1-209ENST00000511426 SPEF1Q9Y4P9 236 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 SPTBN4Q9H254 2564 aa13.09□□□□□ -0.31
SCLT1-209ENST00000511426 IGHV1-18A0A0C4DH31 117 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 IQCF6A8MYZ5 107 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 C16orf97H3BN30 126 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 PRDX4Q13162 271 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 CRIP3Q6Q6R5 217 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 MOB3CQ70IA8 216 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 TOMM5Q8N4H5 51 aa13.08□□□□□ -0.31
SCLT1-209ENST00000511426 OR56B1Q8NGI3 324 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms