RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 TXNL4BQ9NX01 149 aaKnown RBP4.43□□□□□ -1.7
GYPB-212ENST00000511198 TREM2Q9NZC2 230 aa4.43□□□□□ -1.7
GYPB-212ENST00000511198 EMC3Q9P0I2 261 aa4.43□□□□□ -1.7
GYPB-212ENST00000511198 TMCC3Q9ULS5 477 aa4.43□□□□□ -1.7
GYPB-212ENST00000511198 ING4Q9UNL4 249 aa4.43□□□□□ -1.7
GYPB-212ENST00000511198 DIMT1Q9UNQ2 313 aaKnown RBP4.43□□□□□ -1.7
GYPB-212ENST00000511198 ANGPT4Q9Y264 503 aa4.43□□□□□ -1.7
GYPB-212ENST00000511198 GSTK1Q9Y2Q3 226 aa4.43□□□□□ -1.7
GYPB-212ENST00000511198 HSPB11Q9Y547 144 aa4.43□□□□□ -1.7
GYPB-212ENST00000511198 IGLV3-16A0A075B6K0 115 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 A0A1B0GVI7 797 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 FAM240BA0A1B0GVZ2 78 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 C7orf66A4D0T2 115 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 WASHC1A8K0Z3 465 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 FAAHO00519 579 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 PRKRAO75569 313 aaKnown RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 TSPAN9O75954 239 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 SLC22A5O76082 557 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 OR7A10O76100 309 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 CDRT1O95170 752 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 CPSF4O95639 269 aaKnown RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 IFNA7P01567 189 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 IFNW1P05000 195 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 HIST1H2AGP0C0S8 130 aaPredicted RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 OR56A5P0C7T3 313 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 ANXA3P12429 323 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 MYOD1P15172 320 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 ZNF708P17019 499 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 TNNI3P19429 210 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 HIST1H2ADP20671 130 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 IL11P20809 199 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 IL32P24001 234 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 CMPK1P30085 196 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 GABRA5P31644 462 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 INPP1P49441 399 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 ATP12AP54707 1039 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 WNT4P56705 351 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 LMO4P61968 165 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 TPBGQ13641 420 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 SCARB2Q14108 478 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 HEPACAMQ14CZ8 416 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 KLF17Q5JT82 389 aaPredicted RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 CPTPQ5TA50 214 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 ACSM2BQ68CK6 577 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 LAMTOR1Q6IAA8 161 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 ZNF770Q6IQ21 691 aaPredicted RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 KCTD18Q6PI47 426 aaPredicted RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 CD200R1LQ6Q8B3 271 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 CASP12Q6UXS9 341 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 ZNF730Q6ZMV8 503 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 TSEN54Q7Z6J9 526 aaKnown RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 RNF113BQ8IZP6 322 aaKnown RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 TAGAPQ8N103 731 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 NATD1Q8N6N6 113 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 AQP11Q8NBQ7 271 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 DMBX1Q8NFW5 382 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 OR9Q2Q8NGE9 314 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 LHFPL5Q8TAF8 219 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 LKAAEAR1Q8TD35 194 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 ELMO1Q92556 727 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 UFD1Q92890 307 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 HGDQ93099 445 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 SPACA9Q96E40 222 aaPredicted RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 FBXO17Q96EF6 278 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 H2AFJQ9BTM1 129 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 TMEM43Q9BTV4 400 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 PRRG3Q9BZD7 231 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 NARFLQ9H6Q4 476 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 NMNAT1Q9HAN9 279 aaPredicted RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 AMBNQ9NP70 447 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 FGF20Q9NP95 211 aaPredicted RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 ZNF275Q9NSD4 429 aaPredicted RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 ACER3Q9NUN7 267 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 MCUBQ9NWR8 336 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 TAS2R16Q9NYV7 291 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 TAS2R7Q9NYW3 318 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 ATP6V1HQ9UI12 483 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 CRLS1Q9UJA2 301 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 A4GNTQ9UNA3 340 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 TCF19Q9Y242 345 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 AMDHD2Q9Y303 409 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 EXOSC1Q9Y3B2 195 aaKnown RBP4.42□□□□□ -1.7
GYPB-212ENST00000511198 PRSS21Q9Y6M0 314 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 DNAH2Q9P225 4427 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
GYPB-212ENST00000511198 TEX13CA0A0J9YWL9 993 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 TRDV1A0A1B0GX56 115 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 IQCF5A8MTL0 148 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 INMT-MINDY4F8WBC2 141 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 H0YIV9 168 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 LDLRAD4O15165 306 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 PLPP2O43688 288 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 ENTPD6O75354 484 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 DHFRP00374 187 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 ADRA2AP08913 450 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 IGLL1P15814 213 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 STOMP27105 288 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 BDKRB2P30411 391 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 TIA1P31483 386 aaKnown RBP eCLIP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms