RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 LRRC31Q6UY01 552 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 LINC00336Q6ZUF6 198 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ACOT7LQ6ZUV0 252 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ASRGL1Q7L266 308 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 STK40Q8N2I9 435 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 CADM2Q8N3J6 435 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 CCDC54Q8NEL0 328 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 PXT1Q8NFP0 134 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 OR9A4Q8NGU2 314 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 OR52N1Q8NH53 320 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 PLPPR1Q8TBJ4 325 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 RDH11Q8TC12 318 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 FNDC8Q8TC99 324 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ACTRT1Q8TDG2 376 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ZNF721Q8TF20 911 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 APH1BQ8WW43 257 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 IFT81Q8WYA0 676 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 BORCS5Q969J3 196 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 RPEQ96AT9 228 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 APH1AQ96BI3 265 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 DGCR14Q96DF8 476 aaKnown RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 SLC25A38Q96DW6 304 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 CENPNQ96H22 339 aaPredicted RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 ZNF75AQ96N20 296 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 STACQ99469 402 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 RBBP8Q99708 897 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ATP5SQ99766 215 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 SLC6A7Q99884 636 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 DDA1Q9BW61 102 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 HCAR1Q9BXC0 346 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 MRPS26Q9BYN8 205 aaKnown RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 UCK2Q9BZX2 261 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ZYG11BQ9C0D3 744 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 COMMD4Q9H0A8 199 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ING2Q9H160 280 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 TPK1Q9H3S4 243 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 GPN2Q9H9Y4 310 aaPredicted RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 POPDC2Q9HBU9 364 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 MYOZ1Q9NP98 299 aaPredicted RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 GID8Q9NWU2 228 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 SMPXQ9UHP9 88 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 PURGQ9UJV8 347 aaKnown RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 ZNF221Q9UK13 617 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 TFR2Q9UP52 801 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 PSG11Q9UQ72 335 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 SLC17A4Q9Y2C5 497 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ARL5AQ9Y689 179 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 USH1CQ9Y6N9 552 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 DISP2A7MBM2 1401 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ZNF609O15014 1411 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ZNF532Q9HCE3 1301 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 A0A1B0GUL6 1792 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 ANKRD36CQ5JPF3 1778 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 MYH3P11055 1940 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 NID2Q14112 1375 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 IGLV3-16A0A075B6K0 115 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 NSG1A0A0A6YYJ2 146 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 A0A1B0GV72 72 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 PP2D1A8MPX8 630 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 F5H6K3 240 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 H0Y980 276 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 hCG_2039718K7EN88 272 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 SLC9A3R1O14745 358 aaPredicted RBP2.89□□□□□ -1.95
NUP54-209ENST00000510569 SH2D1BO14796 132 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 PPP1R2P9O14990 202 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 MSH4O15457 936 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 LY75O60449 1722 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 UGT1A9O60656 530 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 DPM1O60762 260 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 TOXO94900 526 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 GLSO94925 669 aaPredicted RBP2.89□□□□□ -1.95
NUP54-209ENST00000510569 DIRAS1O95057 198 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 CTDNEP1O95476 244 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 CD160O95971 181 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 SERPINA1P01009 418 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 HLA-AP01891 365 aaKnown RBP2.89□□□□□ -1.95
NUP54-209ENST00000510569 MMP1P03956 469 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 IGKV5-2P06315 115 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 GUSBP08236 651 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 HBQ1P09105 142 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 SLC2A1P11166 492 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 RNH1P13489 461 aaKnown RBP2.89□□□□□ -1.95
NUP54-209ENST00000510569 ZNF35P13682 527 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 H2AFXP16104 143 aaPredicted RBP2.89□□□□□ -1.95
NUP54-209ENST00000510569 CRABP1P29762 137 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 FOXN2P32314 431 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 GCKP35557 465 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 ARR3P36575 388 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 NSG1P42857 185 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 OR3A4PP47883 348 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 GABRA4P48169 554 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 TMED10P49755 219 aaKnown RBP2.89□□□□□ -1.95
NUP54-209ENST00000510569 DAP3P51398 398 aaKnown RBP2.89□□□□□ -1.95
NUP54-209ENST00000510569 PRKXP51817 358 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 AP2S1P53680 142 aaPredicted RBP2.89□□□□□ -1.95
NUP54-209ENST00000510569 PKNOX1P55347 436 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 RAG2P55895 527 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 PSME3P61289 254 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 NTHL1P78549 312 aa2.89□□□□□ -1.95
NUP54-209ENST00000510569 C2orf80Q0P641 193 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms