RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ELP2Q6IA86 826 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 TMEM156Q8N614 296 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 CSNK2A3Q8NEV1 391 aa15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 INTS12Q96CB8 462 aaKnown RBP15.76■□□□□ 0.11
CCHCR1-228ENST00000509552 WDR87Q6ZQQ6 2873 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 C5orf63A6NC05 138 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 NAT2P11245 290 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 FCGR2AP12318 317 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 BLVRBP30043 206 aaPredicted RBP15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 DMRTC1Q5HYR2 192 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 CCDC36Q8IYA8 594 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 ZBTB44Q8NCP5 570 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 AGBL5Q8NDL9 886 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 CCDC54Q8NEL0 328 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 PAQR8Q8TEZ7 354 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 NABP1Q96AH0 204 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 RAB18Q9NP72 206 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 PIGLQ9Y2B2 252 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 FLVCR1Q9Y5Y0 555 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 MED12Q93074 2177 aa15.75■□□□□ 0.11
CCHCR1-228ENST00000509552 A0A0B4J2A0 478 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 CFIP05156 583 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 GP1BAP07359 652 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 FAHP16930 419 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 SERPINA2P20848 420 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 SNU13P55769 128 aaKnown RBP15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 HIST1H3AP68431 136 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 SLC9A3R2Q15599 337 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 HIST2H3PS2Q5TEC6 136 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 CLEC18BQ6UXF7 455 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 HIST2H3AQ71DI3 136 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 C1QL2Q7Z5L3 287 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 PEG10Q86TG7 708 aaKnown RBP15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 TMEM123Q8N131 208 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 SPTSSAQ969W0 71 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 TMEM230Q96A57 120 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 C10orf35Q96D05 121 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 UCN2Q96RP3 112 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 ULBP2Q9BZM5 246 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 CHST5Q9GZS9 411 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 ELL3Q9HB65 397 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 BARX1Q9HBU1 254 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 PLEK2Q9NYT0 353 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 SHPKQ9UHJ6 478 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 SERPINE3A8MV23 424 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 M0R135 149 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 ZIC3O60481 467 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 APOC3P02656 99 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 PGAM2P15259 253 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 ATF4P18848 351 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 UBE2V2Q15819 145 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 RTL6Q6ICC9 239 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 TFAP2EQ6VUC0 442 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 MAML2Q8IZL2 1156 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 LHFPL5Q8TAF8 219 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 ZNF799Q96GE5 643 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 MS4A7Q9GZW8 240 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 LDAHQ9H6V9 325 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 HPF1Q9NWY4 346 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 HS3ST3B1Q9Y662 390 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 EML6Q6ZMW3 1958 aa15.74■□□□□ 0.11
CCHCR1-228ENST00000509552 CCDC163A0A0D9SF12 145 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 G3V3Y1 287 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 CPT2P23786 658 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 PPIAP62937 165 aaKnown RBP15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 UNQ6126/PRO20091Q6UXV3 157 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 Q7L0L9 218 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 LHFPL1Q86WI0 220 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 RPS19BP1Q86WX3 136 aaKnown RBP15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 OR13G1Q8NGZ3 307 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 HAS2Q92819 552 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 PIGQQ9BRB3 760 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 PECRQ9BY49 303 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 PROK2Q9HC23 129 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 EHFQ9NZC4 300 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 PCDHGA1Q9Y5H4 931 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 TRBV6-7A0A0A0MS04 114 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 TEX13DA0A0J9YY54 714 aaPredicted RBP15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 GJE1A6NN92 205 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 FOXI3A8MTJ6 420 aaPredicted RBP15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 CBR3O75828 277 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 KLF7O75840 302 aaPredicted RBP15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 CD63P08962 238 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 OTX1P32242 354 aaPredicted RBP15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 RAC1P63000 192 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 CHRFAM7AQ494W8 412 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 SLC16A14Q7RTX9 510 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 OR5AP2Q8NGF4 316 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 PIK3IP1Q96FE7 263 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 NECAB3Q96P71 396 aaPredicted RBP15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 RTBDNQ9BSG5 229 aaPredicted RBP15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 TM2D1Q9BX74 207 aa15.73■□□□□ 0.11
CCHCR1-228ENST00000509552 NSG1A0A0A6YYJ2 146 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 CCDC85CA6NKD9 419 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 HPNP05981 417 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 TPT1P13693 172 aaKnown RBP15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 PI3P19957 117 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 TRA2AQ13595 282 aaKnown RBP eCLIP15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 PIGMQ9H3S5 423 aa15.72■□□□□ 0.11
CCHCR1-228ENST00000509552 FOXD3Q9UJU5 478 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms