RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CDC14BO60729 498 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 EIF1BO60739 113 aaKnown RBP12.71□□□□□ -0.38
DDX41-208ENST00000507955 PLATP00750 562 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 CD74P04233 296 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 CYC1P08574 325 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 B4GALT1P15291 398 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 CARD18P57730 90 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 ZNF273Q14593 569 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 BEX5Q5H9J7 111 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 GJC3Q8NFK1 279 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 OR5M8Q8NGP6 311 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 PTX4Q96A99 478 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 ARHGAP5-AS1Q96IT6 56 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 ZNF75AQ96N20 296 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 CST11Q9H112 138 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 OR5H14A6NHG9 310 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 C9orf172C9J069 976 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 CD8AP01732 235 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 HLA-AP01891 365 aaKnown RBP12.7□□□□□ -0.38
DDX41-208ENST00000507955 CELA3AP09093 270 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 CSNK2A1P68400 391 aaPredicted RBP12.7□□□□□ -0.38
DDX41-208ENST00000507955 RIPPLY1Q0D2K3 151 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 KISS1Q15726 138 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 ZNF774Q6NX45 483 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 JMJD6Q6NYC1 403 aaPredicted RBP12.7□□□□□ -0.38
DDX41-208ENST00000507955 AKR7LQ8NHP1 331 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 FGFBP3Q8TAT2 258 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 ABHD3Q8WU67 409 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 CCDC107Q8WV48 283 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 PSMF1Q92530 271 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 NTNG2Q96CW9 530 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 SLC25A21Q9BQT8 299 aaPredicted RBP12.7□□□□□ -0.38
DDX41-208ENST00000507955 C12orf4Q9NQ89 552 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 IFT46Q9NQC8 304 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 PIGLQ9Y2B2 252 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 KCNAB3O43448 404 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 JMJD7P0C870 316 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 AKR1C4P17516 323 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 LSM6P62312 80 aaKnown RBP12.7□□□□□ -0.38
DDX41-208ENST00000507955 SRYQ05066 204 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 C10orf128Q5T292 105 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 DOK3Q7L591 496 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 CASTOR1Q8WTX7 329 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 THOC3Q96J01 351 aaKnown RBP12.7□□□□□ -0.38
DDX41-208ENST00000507955 NAA11Q9BSU3 229 aaPredicted RBP12.7□□□□□ -0.38
DDX41-208ENST00000507955 MOB1AQ9H8S9 216 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 ELL3Q9HB65 397 aaPredicted RBP12.7□□□□□ -0.38
DDX41-208ENST00000507955 BARX1Q9HBU1 254 aaPredicted RBP12.7□□□□□ -0.38
DDX41-208ENST00000507955 PRR13Q9NZ81 148 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 ZNF581Q9P0T4 197 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 UPB1Q9UBR1 384 aa12.7□□□□□ -0.38
DDX41-208ENST00000507955 KIAA1549Q9HCM3 1950 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 COL27A1Q8IZC6 1860 aaPredicted RBP12.69□□□□□ -0.38
DDX41-208ENST00000507955 M0R135 149 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 PI3P19957 117 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 SERPINA2P20848 420 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 GDF1P27539 372 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 AVPR2P30518 371 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 RGS19P49795 217 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 GRB2P62993 217 aaKnown RBP12.69□□□□□ -0.38
DDX41-208ENST00000507955 PPP1R1AQ13522 171 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 ATXN7L3Q14CW9 347 aaPredicted RBP12.69□□□□□ -0.38
DDX41-208ENST00000507955 ZMYND11Q15326 602 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 RAB12Q6IQ22 244 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 EIF4E3Q8N5X7 224 aaKnown RBP12.69□□□□□ -0.38
DDX41-208ENST00000507955 DTWD2Q8NBA8 298 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 OR10D3Q8NH80 312 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 RAB3CQ96E17 227 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 ZNF799Q96GE5 643 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 TMEM59Q9BXS4 323 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 FLVCR1Q9Y5Y0 555 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 A0A0A6YYH2 397 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 RNF222A6NCQ9 220 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 A6NJ64 397 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 FCGR2AP12318 317 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 CTRB1P17538 263 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 ACKR3P25106 362 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 FKBP2P26885 142 aaKnown RBP12.69□□□□□ -0.38
DDX41-208ENST00000507955 CASRP41180 1078 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 C9orf135Q5VTT2 229 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 CTRB2Q6GPI1 263 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 FAM219AQ8IW50 185 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 PXT1Q8NFP0 134 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 SGCZQ96LD1 299 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 MYOZ1Q9NP98 299 aaPredicted RBP12.69□□□□□ -0.38
DDX41-208ENST00000507955 RASL12Q9NYN1 266 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 PLA2G3Q9NZ20 509 aa12.69□□□□□ -0.38
DDX41-208ENST00000507955 NOP16Q9Y3C1 178 aaKnown RBP12.69□□□□□ -0.38
DDX41-208ENST00000507955 CACNA1HO95180 2353 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 ARPC4-TTLL3A0A0A6YYG9 625 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 FAM25EA8MYX2 175 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 B4E171 279 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 MGMTP16455 207 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 CCL1P22362 96 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 CD34P28906 385 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 TSPAN7P41732 249 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 LUMP51884 338 aaPredicted RBP12.68□□□□□ -0.38
DDX41-208ENST00000507955 ARHGDIBP52566 201 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 ATP1B3P54709 279 aa12.68□□□□□ -0.38
DDX41-208ENST00000507955 RAC3P60763 192 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms