RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 RPL18AQ02543 176 aaKnown RBP1.84□□□□□ -2.11
LSM6-205ENST00000507449 YIF1BQ5BJH7 314 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 FAM222AQ5U5X8 452 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 MLIPQ5VWP3 458 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 SLC25A34Q6PIV7 304 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 SLC35D2Q76EJ3 337 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 NDUFAF7Q7L592 441 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 OR2W3Q7Z3T1 314 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 VTCN1Q7Z7D3 282 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 MDP1Q86V88 176 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 OR9A2Q8NGT5 310 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 S100PBPQ96BU1 408 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 ZFP3Q96NJ6 502 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 RDH12Q96NR8 316 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 GABRG3Q99928 467 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 SULT4A1Q9BR01 284 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 ZNF717Q9BY31 904 aaPredicted RBP1.84□□□□□ -2.11
LSM6-205ENST00000507449 ZSCAN16Q9H4T2 348 aaPredicted RBP1.84□□□□□ -2.11
LSM6-205ENST00000507449 DYRK4Q9NR20 520 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 VAX2Q9UIW0 290 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 CHTOPQ9Y3Y2 248 aaKnown RBP1.84□□□□□ -2.11
LSM6-205ENST00000507449 LRRC42Q9Y546 428 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 KPTNQ9Y664 436 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 IGHV1-3A0A0C4DH29 117 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 A0A1W2PPV4 95 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 BTNL10A8MVZ5 291 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 ZNF701M0R085 212 aaPredicted RBP1.83□□□□□ -2.12
LSM6-205ENST00000507449 MANBAO00462 879 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 PSPHP1O15172 72 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 CYB5R3P00387 301 aaPredicted RBP1.83□□□□□ -2.12
LSM6-205ENST00000507449 GCGP01275 180 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 APLNRP35414 380 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 CSKP41240 450 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 KDSRQ06136 332 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 INCA1Q0VD86 236 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 DMC1Q14565 340 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 SHHQ15465 462 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 NKAIN1Q4KMZ8 207 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 TMPRSS11AQ6ZMR5 421 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 MIR7-3HGQ8N6C7 128 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 LRRC52Q8N7C0 313 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 FBXO36Q8NEA4 188 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 OR5T3Q8NGG3 340 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 OR51L1Q8NGJ5 315 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 OR4A15Q8NGL6 344 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 ENKURQ8TC29 256 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 EMC6Q9BV81 110 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 SFXN3Q9BWM7 321 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 ARV1Q9H2C2 271 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 HEBP1Q9NRV9 189 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 TMEM100Q9NV29 134 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 KLF12Q9Y4X4 402 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 TSPOAP1O95153 1857 aa1.83□□□□□ -2.12
LSM6-205ENST00000507449 COL27A1Q8IZC6 1860 aaPredicted RBP1.83□□□□□ -2.12
LSM6-205ENST00000507449 ZNF608Q9ULD9 1512 aaPredicted RBP1.82□□□□□ -2.12
LSM6-205ENST00000507449 C16orf90A8MZG2 172 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 KDELR3O43731 214 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 GMDSO60547 372 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 CCDC22O60826 627 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 SMC2O95347 1197 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 LHBP01229 141 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 NTF3P20783 257 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 PRKACBP22694 351 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 IVDP26440 423 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 PCK1P35558 622 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 TGFBR1P36897 503 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 NAB1Q13506 487 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 LUZP6Q538Z0 58 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 KPRPQ5T749 579 aaPredicted RBP1.82□□□□□ -2.12
LSM6-205ENST00000507449 Q6ZSR6 202 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 ERO1BQ86YB8 467 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 ZCCHC24Q8N2G6 241 aaKnown RBP1.82□□□□□ -2.12
LSM6-205ENST00000507449 TMEM234Q8WY98 164 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 WDR34Q96EX3 536 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 SMARCD1Q96GM5 515 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 IP6K3Q96PC2 410 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 TMEM175Q9BSA9 504 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 RTBDNQ9BSG5 229 aaPredicted RBP1.82□□□□□ -2.12
LSM6-205ENST00000507449 DHX35Q9H5Z1 703 aaKnown RBP1.82□□□□□ -2.12
LSM6-205ENST00000507449 KIR3DX1Q9H7L2 352 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 LINC00574Q9H8X3 128 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 CA10Q9NS85 328 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 ADA2Q9NZK5 511 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 NDRG2Q9UN36 371 aaKnown RBP1.82□□□□□ -2.12
LSM6-205ENST00000507449 PPIL1Q9Y3C6 166 aa1.82□□□□□ -2.12
LSM6-205ENST00000507449 IGHV3OR16-8A0A075B7F1 116 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 IGHV6-1A0A0B4J1U7 121 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 IGKV1-6A0A0C4DH72 117 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 A0A1W2PRF3 423 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 A0A1W2PRM7 423 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 CENPXA8MT69 81 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 DFFAO00273 331 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 POLR1CO15160 346 aaPredicted RBP1.81□□□□□ -2.12
LSM6-205ENST00000507449 CHMP2AO43633 222 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 TTC4O95801 387 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 OTCP00480 354 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 PTHP01270 115 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 MBP02144 154 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 RPN2P04844 631 aa1.81□□□□□ -2.12
LSM6-205ENST00000507449 CD28P10747 220 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms