RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 PRDX4Q13162 271 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 KLRD1Q13241 179 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 TRIM25Q14258 630 aaKnown RBP9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 SNCBQ16143 134 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 OCLNQ16625 522 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 LRRC10Q5BKY1 277 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 CD300LDQ6UXZ3 194 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 RHOUQ7L0Q8 258 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 CMTM4Q8IZR5 234 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 ARHGAP24Q8N264 748 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 GALNT4Q8N4A0 578 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 OR5T2Q8NGG2 359 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 LINC01006Q8NI28 216 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 H1FXQ92522 213 aaKnown RBP9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 RPL3LQ92901 407 aaKnown RBP9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 C12orf43Q96C57 262 aaKnown RBP9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 FEVQ99581 238 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 DCTN5Q9BTE1 182 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 FGF23Q9GZV9 251 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 WDR13Q9H1Z4 485 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 DPAGT1Q9H3H5 408 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 RGCCQ9H4X1 137 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 DNAJB11Q9UBS4 358 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 FAM96BQ9Y3D0 163 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 MPC1Q9Y5U8 109 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 TMEM210A6NLX4 147 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 ZNF850A8MQ14 1090 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 RNASEK-C17orf49H0YIS7 233 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 M0QZ24 198 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 TIMM23O14925 209 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 LYNP07948 512 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 RAP2AP10114 183 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 PAICSP22234 425 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 ACKR3P25106 362 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 POU1F1P28069 291 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 TGM4P49221 684 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 PROK1P58294 105 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 PSMA6P60900 246 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 GUCA2AQ02747 115 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 TAF9Q16594 264 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 PLBD1Q6P4A8 553 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 METAP1DQ6UB28 335 aaPredicted RBP9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 GDPGP1Q6ZNW5 385 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 KCTD8Q6ZWB6 473 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 FTMTQ8N4E7 242 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 Q8N7P7 452 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 OR10Z1Q8NGY1 313 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 OTOSQ8NHW6 89 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 GIPC3Q8TF64 312 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 THEM6Q8WUY1 208 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 HPSE2Q8WWQ2 592 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 LRTOMTQ8WZ04 291 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 OR5P3Q8WZ94 311 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 LYZL4Q96KX0 146 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 GAFA1Q96PS6 74 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 RAB3IPQ96QF0 476 aaPredicted RBP9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 PKP2Q99959 881 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 ABCB9Q9NP78 766 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 HAO2Q9NYQ3 351 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 TAS2R1Q9NYW7 299 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 ZNRD1Q9P1U0 126 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 KLHDC2Q9Y2U9 406 aa9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 CAB39Q9Y376 341 aaPredicted RBP9.48□□□□□ -0.89
HMGCS1-204ENST00000507293 BTBD17A6NE02 478 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 ARRDC5A6NEK1 342 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 PRR23D1E9PI22 279 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 NPFFO15130 113 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 GPR37O15354 613 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 CLPXO76031 633 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 CST4P01036 141 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 CST1P01037 141 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 FBP1P09467 338 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 PRR23D2P0DMB1 279 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 EEF1B2P24534 225 aaKnown RBP9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 GINS1Q14691 196 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 DGUOKQ16854 277 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 ATPAF1Q5TC12 328 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 DHRS7BQ6IAN0 325 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 ASPHD2Q6ICH7 369 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 ZNF788Q6ZQV5 615 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 Q6ZSV7 163 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 TMEM179BQ7Z7N9 219 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 PNKDQ8N490 385 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 ZSCAN4Q8NAM6 433 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 OR8B12Q8NGG6 310 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 C8orf46Q8TAG6 207 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 PIGCQ92535 297 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 CCDC124Q96CT7 223 aaKnown RBP9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 NSL1Q96IY1 281 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 RNF170Q96K19 258 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 LRGUKQ96M69 825 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 DMRTB1Q96MA1 342 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 RBM4BQ9BQ04 359 aaKnown RBP9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 MMP27Q9H306 513 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 SLC25A10Q9UBX3 287 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 ZNF391Q9UJN7 358 aa9.47□□□□□ -0.89
HMGCS1-204ENST00000507293 VPREB3Q9UKI3 123 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms