RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 OR56B2PQ8NGI1 322 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 OR6T1Q8NGN1 323 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 OR2AE1Q8NHA4 323 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 MZB1Q8WU39 189 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 RPL3LQ92901 407 aaKnown RBP5.63□□□□□ -1.51
VCAN-207ENST00000507162 PITX2Q99697 317 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 HDHD2Q9H0R4 259 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 TSPYL1Q9H0U9 437 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 C1orf21Q9H246 121 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 TUBA4BQ9H853 241 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 YY1AP1Q9H869 796 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 NLKQ9UBE8 527 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 ATPIF1Q9UII2 106 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 NPIPB13A6NJU9 1138 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 NPIPB4C9JG80 1138 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 XKRYO14609 159 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 IMPA2O14732 288 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 PSPNO60542 156 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 PTP4A3O75365 173 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 KHDRBS3O75525 346 aaKnown RBP5.62□□□□□ -1.51
VCAN-207ENST00000507162 VIMP08670 466 aaKnown RBP5.62□□□□□ -1.51
VCAN-207ENST00000507162 FAM153BP0C7A2 387 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 ZCCHC18P0CG32 403 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 PIPP12273 146 aaPredicted RBP5.62□□□□□ -1.51
VCAN-207ENST00000507162 ARSBP15848 533 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 GSTT1P30711 240 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 MDH1P40925 334 aaKnown RBP5.62□□□□□ -1.51
VCAN-207ENST00000507162 CDX1P47902 265 aaPredicted RBP5.62□□□□□ -1.51
VCAN-207ENST00000507162 TPTEP56180 551 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 IL18R1Q13478 541 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 FHL3Q13643 280 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 ZNF273Q14593 569 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 SNAPC1Q16533 368 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 MEP1BQ16820 701 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 CXorf66Q5JRM2 361 aaPredicted RBP5.62□□□□□ -1.51
VCAN-207ENST00000507162 TSEN54Q7Z6J9 526 aaKnown RBP5.62□□□□□ -1.51
VCAN-207ENST00000507162 TSPYL5Q86VY4 417 aaPredicted RBP5.62□□□□□ -1.51
VCAN-207ENST00000507162 NKAIN4Q8IVV8 208 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 MICU2Q8IYU8 434 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 C4orf33Q8N1A6 199 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 Q8N1Y9 231 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 DRAM1Q8N682 238 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 OR11H6Q8NGC7 330 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 OR6Q1Q8NGQ2 317 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 OR51A7Q8NH64 312 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 TMEM255BQ8WV15 326 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 DCUN1D4Q92564 292 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 EME1Q96AY2 570 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 FMO2Q99518 471 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 NABP2Q9BQ15 211 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 TMED9Q9BVK6 235 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 EVA1AQ9H8M9 152 aa5.62□□□□□ -1.51
VCAN-207ENST00000507162 PAPOLBQ9NRJ5 636 aaKnown RBP5.62□□□□□ -1.51
VCAN-207ENST00000507162 IGKV1D-17A0A075B6S4 117 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 TEX13CA0A0J9YWL9 993 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 SMIM23A6NLE4 172 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 A8MZ25 164 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 C12orf77C9JDV5 145 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 M0QZK8 103 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 CCRL2O00421 344 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 OVOL1O14753 267 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 TIPRLO75663 272 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 IL6P05231 212 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 IGHV1-8P0DP01 117 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 PSG2P11465 335 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 KRT4P19013 534 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 CD247P20963 164 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 GLRA1P23415 457 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 MXRA7P84157 204 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 TRAP1Q12931 704 aaKnown RBP5.61□□□□□ -1.51
VCAN-207ENST00000507162 FADDQ13158 208 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 SCARB2Q14108 478 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 DUSP7Q16829 419 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 PNLIPRP3Q17RR3 467 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 SNAI3Q3KNW1 292 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 GLYATL3Q5SZD4 288 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 MINOS1Q5TGZ0 78 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 GPR139Q6DWJ6 353 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 LCN8Q6JVE9 175 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 KCTD8Q6ZWB6 473 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 CNPY4Q8N129 248 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 OR4D11Q8NGI4 311 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 OR1N2Q8NGR9 330 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 FAM46AQ96IP4 442 aaKnown RBP5.61□□□□□ -1.51
VCAN-207ENST00000507162 EAF1Q96JC9 268 aaPredicted RBP5.61□□□□□ -1.51
VCAN-207ENST00000507162 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 PRSS27Q9BQR3 290 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 ZNF426Q9BUY5 554 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 ZFAND3Q9H8U3 227 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 SP140LQ9H930 580 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 TBC1D23Q9NUY8 699 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 GRHPRQ9UBQ7 328 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 LRP12Q9Y561 859 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 LHFPL6Q9Y693 200 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 MINOS1-NBL1R4GNA1 71 aa5.61□□□□□ -1.51
VCAN-207ENST00000507162 DYNC1H1Q14204 4646 aaKnown RBP5.61□□□□□ -1.51
VCAN-207ENST00000507162 TRAV27A0A087WT01 109 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 PRSS37A4D1T9 235 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 LINC01548A6NM66 108 aa5.6□□□□□ -1.51
VCAN-207ENST00000507162 C17orf98A8MV24 154 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms