RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 IFT27Q9BW83 186 aa4.68□□□□□ -1.66
GYPB-208ENST00000507009 PAPOLGQ9BWT3 736 aaKnown RBP4.68□□□□□ -1.66
GYPB-208ENST00000507009 WDR13Q9H1Z4 485 aa4.68□□□□□ -1.66
GYPB-208ENST00000507009 METTL8Q9H825 291 aaKnown RBP4.68□□□□□ -1.66
GYPB-208ENST00000507009 ZNF702PQ9H963 129 aa4.68□□□□□ -1.66
GYPB-208ENST00000507009 RAB18Q9NP72 206 aa4.68□□□□□ -1.66
GYPB-208ENST00000507009 PNRC2Q9NPJ4 139 aaKnown RBP4.68□□□□□ -1.66
GYPB-208ENST00000507009 DNAJC27Q9NZQ0 273 aa4.68□□□□□ -1.66
GYPB-208ENST00000507009 MRPL15Q9P015 296 aaKnown RBP4.68□□□□□ -1.66
GYPB-208ENST00000507009 SLC25A10Q9UBX3 287 aaPredicted RBP4.68□□□□□ -1.66
GYPB-208ENST00000507009 CYB5R1Q9UHQ9 305 aa4.68□□□□□ -1.66
GYPB-208ENST00000507009 SIGLEC7Q9Y286 467 aa4.68□□□□□ -1.66
GYPB-208ENST00000507009 SF3B6Q9Y3B4 125 aaKnown RBP4.68□□□□□ -1.66
GYPB-208ENST00000507009 FAM32AQ9Y421 112 aaKnown RBP4.68□□□□□ -1.66
GYPB-208ENST00000507009 V9GYQ6 96 aa4.68□□□□□ -1.66
GYPB-208ENST00000507009 TRBV4-1A0A0J9YWV2 114 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 MEX3AA1L020 520 aaKnown RBP4.67□□□□□ -1.66
GYPB-208ENST00000507009 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.67□□□□□ -1.66
GYPB-208ENST00000507009 CXCR6O00574 342 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 EREGO14944 169 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 PTP4A3O75365 173 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 PTBP3O95758 552 aaKnown RBP4.67□□□□□ -1.66
GYPB-208ENST00000507009 LHBP01229 141 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 AMY2BP19961 511 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 SLC6A6P31641 620 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 VDAC2P45880 294 aaPredicted RBP4.67□□□□□ -1.66
GYPB-208ENST00000507009 FXYD6P3P58550 94 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 ERVFRD-1P60508 538 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 KRT72Q14CN4 511 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 DGUOKQ16854 277 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 KRTAP27-1Q3LI81 207 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 AGBL2Q5U5Z8 902 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 STUMQ69YW2 141 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 DRAM2Q6UX65 266 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 ZNF782Q6ZMW2 699 aaPredicted RBP4.67□□□□□ -1.66
GYPB-208ENST00000507009 FAM57BQ71RH2 274 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 DCXRQ7Z4W1 244 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 LHFPL4Q7Z7J7 247 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 C11orf53Q8IXP5 236 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 CYB561A3Q8NBI2 242 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 ZNRF1Q8ND25 227 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 PROKR2Q8NFJ6 384 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 TSPEARQ8WU66 669 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 FAM162AQ96A26 154 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 SLAMF6Q96DU3 332 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 MED30Q96HR3 178 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 REEP6Q96HR9 211 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 GAFA1Q96PS6 74 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 DDOQ99489 341 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 MICU1Q9BPX6 476 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 RANBP3Q9H6Z4 567 aaPredicted RBP4.67□□□□□ -1.66
GYPB-208ENST00000507009 RNPEPL1Q9HAU8 725 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 KRCC1Q9NPI7 259 aaPredicted RBP4.67□□□□□ -1.66
GYPB-208ENST00000507009 ABCB10Q9NRK6 738 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 SERTAD4Q9NUC0 356 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 GID8Q9NWU2 228 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 MRPL22Q9NWU5 206 aaKnown RBP4.67□□□□□ -1.66
GYPB-208ENST00000507009 HAO2Q9NYQ3 351 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 PCDHGB5Q9Y5G0 923 aa4.67□□□□□ -1.66
GYPB-208ENST00000507009 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 OR6C68A6NDL8 312 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 ANXA2P2A6NMY6 339 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 ZNF850A8MQ14 1090 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 E9PQ18 207 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 M0R1W7 72 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 XRCC2O43543 280 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 GLCEO94923 617 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 TXNDC12O95881 172 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 CCDC159P0C7I6 412 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 PSKH1P11801 424 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 PIPP12273 146 aaPredicted RBP4.66□□□□□ -1.66
GYPB-208ENST00000507009 HSD11B1P28845 292 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 OMPP47874 163 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 TGM4P49221 684 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 CX3CR1P49238 355 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 SLC35A2P78381 396 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 CBX1P83916 185 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 SPIBQ01892 262 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 LIPEQ05469 1076 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.66□□□□□ -1.665e-6■□□□□ 10.7
GYPB-208ENST00000507009 KLF10Q13118 480 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 PRDX4Q13162 271 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 DYNC1I2Q13409 638 aaKnown RBP4.66□□□□□ -1.66
GYPB-208ENST00000507009 SEC23BQ15437 767 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 HCP5Q6MZN7 132 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 SLC16A9Q7RTY1 509 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 ZDHHC21Q8IVQ6 265 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 BATF2Q8N1L9 274 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 FAM156AQ8NDB6 213 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 OR4M1Q8NGD0 313 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 OR5D13Q8NGL4 314 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 OR4C15Q8NGM1 316 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 C8orf46Q8TAG6 207 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 PIGCQ92535 297 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 OTULINQ96BN8 352 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 RCN3Q96D15 328 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 PGAM5Q96HS1 289 aa4.66□□□□□ -1.66
GYPB-208ENST00000507009 GPX7Q96SL4 187 aaPredicted RBP4.66□□□□□ -1.66
GYPB-208ENST00000507009 RTL8AQ9BWD3 113 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms