RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 MAFIPQ8WZ33 124 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 FAM131CQ96AQ9 280 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 SPACA5Q96QH8 159 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 NXF5Q9H1B4 397 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 WFDC1Q9HC57 220 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 TMED3Q9Y3Q3 217 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 BLACEA4D250 179 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 C17orf51A8MQB3 221 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 SEC14L6B5MCN3 397 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 H0Y8X5 98 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 KNG1P01042 644 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 GJA4P35212 333 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 P2RY1P47900 373 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 TAS2R46P59540 309 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 TMEM156Q8N614 296 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 TMEM59Q9BXS4 323 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 PBOV1Q9GZY1 135 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 SMDT1Q9H4I9 107 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 BANF2Q9H503 90 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 BCO1Q9HAY6 547 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 EHFQ9NZC4 300 aa15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 LSM5Q9Y4Y9 91 aaKnown RBP15.1■□□□□ 0.01
SQSTM1-211ENST00000506690 ARGFXA6NJG6 315 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 H7C1Q1 480 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 C1QL1O75973 258 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 SLC26A5P58743 744 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 FMODQ06828 376 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 GPM6BQ13491 265 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 C14orf28Q4W4Y0 310 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 SOHLH1Q5JUK2 328 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 CLEC9AQ6UXN8 241 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 TTLL10Q6ZVT0 673 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 DMRTC2Q8IXT2 367 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 ZNF610Q8N9Z0 462 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 OR10D4PQ8NGN7 298 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 WDR92Q96MX6 357 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 ADOQ96SZ5 270 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 PIGQQ9BRB3 760 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 ST6GALNAC5Q9BVH7 336 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 UCK1Q9HA47 277 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 CHD7Q9P2D1 2997 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 C14orf166Q9Y224 244 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 MMP24Q9Y5R2 645 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 PUS1Q9Y606 427 aaKnown RBP eCLIP15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 BORCS7-ASMTA0A0B4J1R7 106 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 A0A1W2PP11 408 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 HLA-DOBP13765 273 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 OR3A4PP47883 348 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 SNU13P55769 128 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 CSNK2A1P68400 391 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 ARFRP1Q13795 201 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 C12orf76Q8N812 135 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 LFNGQ8NES3 379 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 CSNK2A3Q8NEV1 391 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 HPSE2Q8WWQ2 592 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 NTNG2Q96CW9 530 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 TCTN2Q96GX1 697 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 OR11A1Q9GZK7 315 aa15.09■□□□□ 0.01
SQSTM1-211ENST00000506690 FAM221BA6H8Z2 402 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 E5RGE8 158 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 C5orf67F2Z3F1 127 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 SLC31A2O15432 143 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 RAMP1O60894 148 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 CD63P08962 238 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 GGNBP1Q5YKI7 109 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 SPNS3Q6ZMD2 512 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 OR5AS1Q8N127 324 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 ZNF321PQ8N8H1 164 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 MTIF3Q9H2K0 278 aaKnown RBP15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 SDHAF3Q9NRP4 125 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 NSG2Q9Y328 171 aa15.08■□□□□ 0.01
SQSTM1-211ENST00000506690 HIST1H2BKO60814 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 F10P00742 488 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 PRH1P02810 166 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST1H2BJP06899 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST1H2BOP23527 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST1H2BBP33778 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 GABRA4P48169 554 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 SLC37A1P57057 533 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST1H2BDP58876 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 TAS2R60P59551 318 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST1H2BCP62807 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HSD11B2P80365 405 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 ELOBQ15370 118 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST2H2BEQ16778 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 PRTGQ2VWP7 1150 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.08■□□□□ 0
SQSTM1-211ENST00000506690 LCN10Q6JVE6 187 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 SUMF2Q8NBJ7 301 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST1H2BHQ93079 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 MRPL24Q96A35 216 aaKnown RBP15.08■□□□□ 0
SQSTM1-211ENST00000506690 MEGF10Q96KG7 1140 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST1H2BNQ99877 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 HIST1H2BMQ99879 126 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 SH3BGRL3Q9H299 93 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.08■□□□□ 0
SQSTM1-211ENST00000506690 PCNX3Q9H6A9 2034 aa15.08■□□□□ 0
SQSTM1-211ENST00000506690 PHF3Q92576 2039 aaKnown RBP15.08■□□□□ 0
SQSTM1-211ENST00000506690 A0A087WWC5 75 aa15.07■□□□□ 0
SQSTM1-211ENST00000506690 IGKV1D-43A0A0B4J1Z2 117 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms