RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 LRRC28Q86X40 367 aaPredicted RBP11.94□□□□□ -0.5
SERF1B-204ENST00000506542 C17orf78Q8N4C9 275 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 NKAIN3Q8N8D7 197 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 SAMD12Q8N8I0 201 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 OR1M1Q8NGA1 313 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 OR5D14Q8NGL3 314 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 OR5H6Q8NGV6 325 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 OR2AE1Q8NHA4 323 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 ZNF671Q8TAW3 534 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 LGALS14Q8TCE9 139 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 C10orf35Q96D05 121 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 REEP6Q96HR9 211 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 LIN7BQ9HAP6 207 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 hCG_2014768A0A024R1R8 64 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 C5orf49A4QMS7 147 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 A6NIN4 97 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 M0R1B8 84 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 SLC17A2O00624 439 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 XRCC2O43543 280 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 SERPINA5P05154 406 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 CALCBP10092 127 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 EVX1P49640 407 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 ZNF79Q15937 498 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 GLYATL3Q5SZD4 288 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 GLT8D1Q68CQ7 371 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 FAM166AQ6J272 317 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 MYPOPQ86VE0 399 aaPredicted RBP11.94□□□□□ -0.5
SERF1B-204ENST00000506542 SPSB4Q96A44 273 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 MUCL1Q96DR8 90 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 CMTM3Q96MX0 182 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 OR10A4Q9H209 315 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 TMEM138Q9NPI0 162 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 STEAP1Q9UHE8 339 aa11.94□□□□□ -0.5
SERF1B-204ENST00000506542 ACANP16112 2415 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 FABP12A6NFH5 140 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 ABCD4O14678 606 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 APOA1P02647 267 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 EIF4EP06730 217 aaKnown RBP11.93□□□□□ -0.5
SERF1B-204ENST00000506542 CCL2P13500 99 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 ZNF14P17017 642 aaPredicted RBP11.93□□□□□ -0.5
SERF1B-204ENST00000506542 ELK1P19419 428 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 RAB3AP20336 220 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 CCNOP22674 350 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 BDKRB2P30411 391 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 HOXC12P31275 282 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 APLNRP35414 380 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 THBS4P35443 961 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 ART1P52961 327 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 CLDN12P56749 244 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 SCAND1P57086 179 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 METAP1DQ6UB28 335 aaPredicted RBP11.93□□□□□ -0.5
SERF1B-204ENST00000506542 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 OR13C9Q8NGT0 318 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 AKAP1Q92667 903 aaKnown RBP eCLIP11.93□□□□□ -0.5
SERF1B-204ENST00000506542 APOBEC3DQ96AK3 386 aaPredicted RBP11.93□□□□□ -0.5
SERF1B-204ENST00000506542 SOSTQ9BQB4 213 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 TMEM204Q9BSN7 226 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 CYSLTR2Q9NS75 346 aa11.93□□□□□ -0.5
SERF1B-204ENST00000506542 ZANQ9Y493 2812 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 hCG_38984A0A1B0GV85 526 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 FAM25AB3EWG3 89 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 FAM25CB3EWG5 89 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 FAM25GB3EWG6 89 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 SULT1B1O43704 296 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 ERCC1P07992 297 aaPredicted RBP11.92□□□□□ -0.5
SERF1B-204ENST00000506542 CELA3BP08861 270 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 FAM131AQ6UXB0 335 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 OR5AS1Q8N127 324 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 SLC30A7Q8NEW0 376 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 PP6455Q8WZ26 134 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 FOXRED1Q96CU9 486 aaPredicted RBP11.92□□□□□ -0.5
SERF1B-204ENST00000506542 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 SDHCQ99643 169 aaPredicted RBP11.92□□□□□ -0.5
SERF1B-204ENST00000506542 CHST5Q9GZS9 411 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 OBP2BQ9NPH6 170 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 PIGLQ9Y2B2 252 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 RNF115Q9Y4L5 304 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 ETV7Q9Y603 341 aa11.92□□□□□ -0.5
SERF1B-204ENST00000506542 SHISA9B4DS77 424 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 ALX3O95076 343 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 CD3EP07766 207 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 CBR1P16152 277 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 FAHP16930 419 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 ACKR3P25106 362 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 PTBP1P26599 531 aaKnown RBP eCLIP11.91□□□□□ -0.5
SERF1B-204ENST00000506542 MAP2K3P46734 347 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 TAGLNQ01995 201 aaKnown RBP11.91□□□□□ -0.5
SERF1B-204ENST00000506542 ZNF92Q03936 586 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 TNK1Q13470 666 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 TESK1Q15569 626 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 OR8B8Q15620 311 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 RAB11BQ15907 218 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 TBC1D28Q2M2D7 210 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 UBE2NLQ5JXB2 153 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 C1orf100Q5SVJ3 147 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 UTS2BQ765I0 119 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 PAQR4Q8N4S7 273 aaPredicted RBP11.91□□□□□ -0.5
SERF1B-204ENST00000506542 SEMA6DQ8NFY4 1073 aa11.91□□□□□ -0.5
SERF1B-204ENST00000506542 OR6M1Q8NGM8 313 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms