RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 A0A1B0GVI7 797 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 A6NLC8 198 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 TMEM210A6NLX4 147 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 ZNF850A8MQ14 1090 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 PRR32B1ATL7 298 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 B4DSR2 109 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 PPIAL4DF5H284 164 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 H0YJX3 145 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 J3QLW9 94 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 LMX1BO60663 402 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 SRSF10O75494 262 aaKnown RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 DHRS3O75911 302 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 FSTL3O95633 263 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 CLIC3O95833 236 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 CYB5R3P00387 301 aaPredicted RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 SERPINA3P01011 423 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 TTRP02766 147 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 RPSAP08865 295 aaKnown RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 PPIAL4FP0DN26 164 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 IGHV4-31P0DP07 118 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 ZNF12P17014 697 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 ZNF19P17023 458 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 ANOS1P23352 680 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 CPT2P23786 658 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 ISL1P61371 349 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 BTG1P62324 171 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 MRPL28Q13084 256 aaKnown RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 PRDX4Q13162 271 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 MED21Q13503 144 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 DOC2BQ14184 412 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 GALEQ14376 348 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 KCNJ8Q15842 424 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 CDONQ4KMG0 1287 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 TMEM155Q4W5P6 130 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 TP53I3Q53FA7 332 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 SPRNQ5BIV9 151 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 C6orf52Q5T4I8 152 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 ZNF684Q5T5D7 378 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 FAM166AQ6J272 317 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 KCTD8Q6ZWB6 473 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 DOK3Q7L591 496 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 LHFPL3Q86UP9 236 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 LRRC28Q86X40 367 aaPredicted RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 CATSPERDQ86XM0 798 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 ZDHHC23Q8IYP9 409 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 C8orf59Q8N0T1 100 aaPredicted RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 MUC20Q8N307 709 aaPredicted RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 SPICQ8N5J4 248 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 CLDND2Q8NHS1 167 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 Q8TCH9 128 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 HAVCR2Q8TDQ0 301 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 RORBQ92753 470 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 PPP1R14AQ96A00 147 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 MSI2Q96DH6 328 aaKnown RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 RNF170Q96K19 258 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 LYZL4Q96KX0 146 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 GAL3ST1Q99999 423 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 ALG8Q9BVK2 526 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 RTL8AQ9BWD3 113 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 PAPOLGQ9BWT3 736 aaKnown RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 ZNF665Q9H7R5 613 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 FGF20Q9NP95 211 aaPredicted RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 UFSP2Q9NUQ7 469 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 CHCHD3Q9NX63 227 aaKnown RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 UBAP1Q9NZ09 502 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 PLCE1Q9P212 2302 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 RNF7Q9UBF6 113 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 NKX1-2Q9UD57 310 aaPredicted RBP6.12□□□□□ -1.43
GYPB-206ENST00000506516 ENPP5Q9UJA9 477 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 KCNS2Q9ULS6 477 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 SLC22A13Q9Y226 551 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 PIGLQ9Y2B2 252 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 PPIAL4AQ9Y536 164 aa6.12□□□□□ -1.43
GYPB-206ENST00000506516 ARFGEF3Q5TH69 2177 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 IGHV3-64DA0A0J9YX35 117 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 DHRS7CA6NNS2 312 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 P2RY10O00398 339 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 WNT9BO14905 357 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 SYT7O43581 403 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 FAM20BO75063 409 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 WBP4O75554 376 aaKnown RBP6.11□□□□□ -1.43
GYPB-206ENST00000506516 PTBP3O95758 552 aaKnown RBP6.11□□□□□ -1.43
GYPB-206ENST00000506516 NRASP01111 189 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 IGLV3-1P01715 115 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 IGHV2-70P01814 119 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 HTR1AP08908 422 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 UBCP0CG48 685 aaKnown RBP6.11□□□□□ -1.43
GYPB-206ENST00000506516 MYL12AP19105 171 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 PCMT1P22061 227 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 ACKR3P25106 362 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 DCKP27707 260 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 IL2RGP31785 369 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 ADMP35318 185 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 MDH2P40926 338 aaKnown RBP6.11□□□□□ -1.43
GYPB-206ENST00000506516 CCR9P51686 369 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 GBX2P52951 348 aaPredicted RBP6.11□□□□□ -1.43
GYPB-206ENST00000506516 OR12D2P58182 307 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 LMO4P61968 165 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 CSNK2BP67870 215 aa6.11□□□□□ -1.43
GYPB-206ENST00000506516 MFGE8Q08431 387 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms