RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 HIF1ANQ9NWT6 349 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 C1orf123Q9NWV4 160 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 MIOXQ9UGB7 285 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 PIGLQ9Y2B2 252 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 LRCH1Q9Y2L9 728 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 HSPE1-MOB4S4R3N1 261 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 NF1P21359 2839 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 A0A0G2JMP0 313 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 A0A0X1KG70 313 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 FOXH1O75593 365 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 IGHA1P01876 353 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 RPS2P15880 293 aaKnown RBP14.01□□□□□ -0.17
SNCA-209ENST00000506244 ZNF12P17014 697 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 CCL1P22362 96 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 CAPGP40121 348 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 PMELP40967 661 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 MRPL28Q13084 256 aaKnown RBP14.01□□□□□ -0.17
SNCA-209ENST00000506244 ZNF404Q494X3 552 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 ESCO2Q56NI9 601 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 KCTD8Q6ZWB6 473 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 ZNF771Q7L3S4 317 aaPredicted RBP14.01□□□□□ -0.17
SNCA-209ENST00000506244 TEX29Q8N6K0 151 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 OR1M1Q8NGA1 313 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 OR4M2Q8NGB6 313 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 HAVCR2Q8TDQ0 301 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 APH1BQ8WW43 257 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 OR5P3Q8WZ94 311 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 RORBQ92753 470 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 RNPEPL1Q9HAU8 725 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 MRPS18AQ9NVS2 196 aaKnown RBP14.01□□□□□ -0.17
SNCA-209ENST00000506244 AASSQ9UDR5 926 aa14.01□□□□□ -0.17
SNCA-209ENST00000506244 OR5B21A6NL26 309 aa14□□□□□ -0.17
SNCA-209ENST00000506244 CEACAM18A8MTB9 384 aa14□□□□□ -0.17
SNCA-209ENST00000506244 F5H0A9 414 aaPredicted RBP14□□□□□ -0.17
SNCA-209ENST00000506244 P2RY10O00398 339 aa14□□□□□ -0.17
SNCA-209ENST00000506244 SYT7O43581 403 aa14□□□□□ -0.17
SNCA-209ENST00000506244 FAHP16930 419 aa14□□□□□ -0.17
SNCA-209ENST00000506244 GATA3P23771 443 aa14□□□□□ -0.17
SNCA-209ENST00000506244 ADARB1P78563 741 aaKnown RBP14□□□□□ -0.17
SNCA-209ENST00000506244 ZNF154Q13106 437 aa14□□□□□ -0.17
SNCA-209ENST00000506244 GALEQ14376 348 aa14□□□□□ -0.17
SNCA-209ENST00000506244 CR1LQ2VPA4 569 aa14□□□□□ -0.17
SNCA-209ENST00000506244 CLVS2Q5SYC1 327 aa14□□□□□ -0.17
SNCA-209ENST00000506244 FAM120AOSQ5T036 256 aa14□□□□□ -0.17
SNCA-209ENST00000506244 PLCXD3Q63HM9 321 aa14□□□□□ -0.17
SNCA-209ENST00000506244 DCDC5Q6ZRR9 648 aa14□□□□□ -0.17
SNCA-209ENST00000506244 C8orf59Q8N0T1 100 aaPredicted RBP14□□□□□ -0.17
SNCA-209ENST00000506244 SYS1Q8N2H4 156 aa14□□□□□ -0.17
SNCA-209ENST00000506244 ALG8Q9BVK2 526 aa14□□□□□ -0.17
SNCA-209ENST00000506244 TLNRD1Q9H1K6 362 aa14□□□□□ -0.17
SNCA-209ENST00000506244 VCX3BQ9H321 246 aa14□□□□□ -0.17
SNCA-209ENST00000506244 AMBNQ9NP70 447 aa14□□□□□ -0.17
SNCA-209ENST00000506244 SLC22A13Q9Y226 551 aa14□□□□□ -0.17
SNCA-209ENST00000506244 V9GYS6 101 aa14□□□□□ -0.17
SNCA-209ENST00000506244 TRAV38-1A0A0B4J264 116 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 LGALS8O00214 317 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 WBP4O75554 376 aaKnown RBP13.99□□□□□ -0.17
SNCA-209ENST00000506244 CLIC3O95833 236 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 RPSAP08865 295 aaKnown RBP13.99□□□□□ -0.17
SNCA-209ENST00000506244 HTR1AP08908 422 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 GNG3P63215 75 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 HNRNPA0Q13151 305 aaKnown RBP13.99□□□□□ -0.17
SNCA-209ENST00000506244 MED21Q13503 144 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 CEACAM21Q3KPI0 293 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 WDR38Q5JTN6 314 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 Q6ZSR3 168 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 WDR86Q86TI4 376 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 OR8B3Q8NGG8 313 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 OR5A2Q8NGI9 324 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 LRRC29Q8WV35 223 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 HPSE2Q8WWQ2 592 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 NEIL1Q96FI4 390 aaPredicted RBP13.99□□□□□ -0.17
SNCA-209ENST00000506244 RNF170Q96K19 258 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 C4orf36Q96KX1 117 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 OR8B2Q96RD0 313 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 TMEM246Q9BRR3 403 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 JAM3Q9BX67 310 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 TMEM165Q9HC07 324 aa13.99□□□□□ -0.17
SNCA-209ENST00000506244 NIPBLQ6KC79 2804 aaeCLIP13.99□□□□□ -0.17
SNCA-209ENST00000506244 ANK3Q12955 4377 aaKnown RBP13.98□□□□□ -0.17
SNCA-209ENST00000506244 PPIAL4CA0A0B4J2A2 164 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 A0A1B0GTI1 187 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 LOC107986453A0A1B0GWG9 222 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 OOEPA6NGQ2 149 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 A8MXK9 166 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 J3QLI3 93 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 J3QLW9 94 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 NDUFA2O43678 99 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 PLPP2O43688 288 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 ZNF205O95201 554 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 NRASP01111 189 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 FAM157CP0CG43 387 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 ZNF19P17023 458 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 SRD5A1P18405 259 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 DCKP27707 260 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 CD80P33681 288 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 CFHR2P36980 270 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 GPM6AP51674 278 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 CCR9P51686 369 aa13.98□□□□□ -0.17
SNCA-209ENST00000506244 OR12D2P58182 307 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms