RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 RHBDL1O75783 438 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 SLC9A3R2Q15599 337 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 DEFB112Q30KQ8 113 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 C9orf139Q6ZV77 190 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 KRT77Q7Z794 578 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 SCCPDHQ8NBX0 429 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 GCDHQ92947 438 aaPredicted RBP13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 OR8B4Q96RC9 309 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 IL4I1Q96RQ9 567 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 APOL4Q9BPW4 351 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 PCGF1Q9BSM1 259 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 MS4A7Q9GZW8 240 aaPredicted RBP13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 SEMA6AQ9H2E6 1030 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 RNPEPL1Q9HAU8 725 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 ADGRL4Q9HBW9 690 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 KRT84Q9NSB2 600 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 SNTG1Q9NSN8 517 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 AKR7A2O43488 359 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 ENSAO43768 121 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 CST4P01036 141 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 APOC1P02654 83 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 HOXB6P17509 224 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 PRTN3P24158 256 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 BAMBIQ13145 260 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 STUMQ69YW2 141 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 BTN2A1Q7KYR7 527 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 GALNT4Q8N4A0 578 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 CSNK2A3Q8NEV1 391 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 JMJD8Q96S16 334 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 CIB1Q99828 191 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 NIPAL2Q9H841 368 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 ERVK-18Q9QC07 812 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 KAAG1Q9UBP8 84 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 AP4S1Q9Y587 144 aa13.82□□□□□ -0.2
PDLIM7-215ENST00000506161 CENPVL3A0A0U1RRI6 287 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 ZNF879B4DU55 563 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 G3V2T6 193 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 TMPRSS2O15393 492 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 APOL3O95236 402 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 TTRP02766 147 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 ARF6P62330 175 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 ESRRGP62508 458 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 ROM1Q03395 351 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 FAM76BQ5HYJ3 339 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 CEP78Q5JTW2 689 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 C1orf146Q5VVC0 180 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 MEPCEQ7L2J0 689 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 KRT74Q7RTS7 529 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 TMEM163Q8TC26 289 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 OR51E1Q8TCB6 317 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 DNAJC9Q8WXX5 260 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 ST8SIA4Q92187 359 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 FAM71F1Q96KD3 344 aaPredicted RBP13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 PBOV1Q9GZY1 135 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 RGCCQ9H4X1 137 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 SP140LQ9H930 580 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 MRM2Q9UI43 246 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 TGP01266 2768 aa13.81□□□□□ -0.2
PDLIM7-215ENST00000506161 TMEM269A0A1B0GVZ9 245 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 HKR1P10072 659 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 FAHP16930 419 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 CFL1P23528 166 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 FASP25445 335 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 GNALP38405 381 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 NPY4RP50391 375 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 GPM6AP51674 278 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 CXCR4P61073 352 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 PDZD9Q8IXQ8 264 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 SLC35F2Q8IXU6 374 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 ZNF679Q8IYX0 411 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 UBE2FQ969M7 185 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 RNF170Q96K19 258 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 WDFY2Q96P53 400 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 GAFA1Q96PS6 74 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 CNN2Q99439 309 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 ELL3Q9HB65 397 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 GPR84Q9NQS5 396 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 RPUSD1Q9UJJ7 312 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 MPC1Q9Y5U8 109 aa13.8□□□□□ -0.2
PDLIM7-215ENST00000506161 A0A0U1RQV5 110 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 A0A1B0GTI1 187 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 A6NIN4 97 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 SAC3D1A6NKF1 404 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 HOXA3O43365 443 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 TOX4O94842 621 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 RNASE1P07998 156 aaKnown RBP13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 TGM4P49221 684 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 IKZF1Q13422 519 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 DGUOKQ16854 277 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 NXNL2Q5VZ03 156 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 ASRGL1Q7L266 308 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 ZDHHC23Q8IYP9 409 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 LY6G5BQ8NDX9 201 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 ZNF488Q96MN9 340 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 RAB3IPQ96QF0 476 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 TBX5Q99593 518 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 MICU1Q9BPX6 476 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 RTL8AQ9BWD3 113 aa13.79□□□□□ -0.2
PDLIM7-215ENST00000506161 OR51I2Q9H344 312 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms