RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PKDREJQ9NTG1 2253 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 PCNX2A6NKB5 2137 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 FBXO24O75426 580 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 PMS2P2O95744 297 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 MMP15P51511 669 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 IAH1Q2TAA2 248 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-207ENST00000504761 PDZD9Q8IXQ8 264 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 PAQR8Q8TEZ7 354 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 ARHGAP5-AS1Q96IT6 56 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 FAM210AQ96ND0 272 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 PRRX2Q99811 253 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 MS4A18H0YCH9 400 aa12.46□□□□□ -0.42
TCOF1-207ENST00000504761 HSD17B6O14756 317 aa12.46□□□□□ -0.42
TCOF1-207ENST00000504761 THBS4P35443 961 aa12.46□□□□□ -0.42
TCOF1-207ENST00000504761 MECP2P51608 486 aaKnown RBP12.46□□□□□ -0.42
TCOF1-207ENST00000504761 MS4A18Q3C1V0 323 aa12.46□□□□□ -0.42
TCOF1-207ENST00000504761 RNLSQ5VYX0 342 aa12.46□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF573Q86YE8 665 aa12.46□□□□□ -0.42
TCOF1-207ENST00000504761 SLC30A7Q8NEW0 376 aa12.46□□□□□ -0.42
TCOF1-207ENST00000504761 TANC1Q9C0D5 1861 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 AQP8O94778 261 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 APOC3P02656 99 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 TGM1P22735 817 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 GLRA1P23415 457 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 PTGFRP43088 359 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 CISD2Q8N5K1 135 aaKnown RBP12.45□□□□□ -0.42
TCOF1-207ENST00000504761 ASB5Q8WWX0 329 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 WDFY2Q96P53 400 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 NECAP2Q9NVZ3 263 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 FRMPD3Q5JV73 1810 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF705EA8MWA4 302 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-207ENST00000504761 M0R036 132 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 RAMP1O60894 148 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 GLSO94925 669 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-207ENST00000504761 ACP1P24666 158 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 CD300CQ08708 224 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 HIKESHIQ53FT3 197 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 LRRTM1Q86UE6 522 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 OSR2Q8N2R0 312 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 LILRB2Q8N423 598 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 TMEM185AQ8NFB2 350 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 PLPPR2Q96GM1 343 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.45□□□□□ -0.42
TCOF1-207ENST00000504761 ST6GALNAC2Q9UJ37 374 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 WDR1O75083 606 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 CTAG2O75638 210 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 BTG1P62324 171 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 ACSM1Q08AH1 577 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 DYRK1AQ13627 763 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 OR2A2Q6IF42 318 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 RNF133Q8WVZ7 376 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 FAM131CQ96AQ9 280 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 SF3B5Q9BWJ5 86 aaKnown RBP12.45□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF436Q9C0F3 470 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-207ENST00000504761 MEIKINA0A087WXM9 373 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 RFPL3SP0C7P2 107 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 OR5H8P0DN80 308 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 NDUFB7P17568 137 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 PTAFRP25105 342 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 AKR1D1P51857 326 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 SLC23A1Q9UHI7 598 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 POLDIP2Q9Y2S7 368 aa12.45□□□□□ -0.42
TCOF1-207ENST00000504761 NFYAP23511 347 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-207ENST00000504761 FUT6P51993 359 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 CD300LFQ8TDQ1 290 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 QPCTLQ9NXS2 382 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 TFAP2EQ6VUC0 442 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 TIPARPQ7Z3E1 657 aaKnown RBP12.44□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF285Q96NJ3 590 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 GPR35Q9HC97 309 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 A0A0B4J2A0 478 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 PYCARD-AS1I3L0S3 204 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 SPRY3O43610 288 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 PNPP00491 289 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 IFI6P09912 130 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 FCGR2CP31995 323 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 ERVK-16P61578 105 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 LSM6P62312 80 aaKnown RBP12.44□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF767PQ75MW2 155 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 GVQW1Q8N7I0 195 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 STOML3Q8TAV4 291 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 EIF5A2Q9GZV4 153 aaKnown RBP12.44□□□□□ -0.42
TCOF1-207ENST00000504761 ASF1BQ9NVP2 202 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 SHPKQ9UHJ6 478 aa12.44□□□□□ -0.42
TCOF1-207ENST00000504761 MYO7BQ6PIF6 2116 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 CATSPERDQ86XM0 798 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 WDSUB1Q8N9V3 476 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 TMIGD3P0DMS9 266 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-207ENST00000504761 CD276Q5ZPR3 534 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 KIRREL1Q96J84 757 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 SLC7A10Q9NS82 523 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 KIR3DL2P43630 455 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 CAMLGP49069 296 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 IFITM3Q01628 133 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 OPCMLQ14982 345 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 TSC22D1Q15714 1073 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 OR2B11Q5JQS5 317 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 ZNRF4Q8WWF5 429 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms