RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CD40P25942 277 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 GNALP38405 381 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 OR3A4PP47883 348 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 MMP15P51511 669 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 PPP3R1P63098 170 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 IFITM3Q01628 133 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 PSG7Q13046 419 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 UNC119Q13432 240 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 CLVS2Q5SYC1 327 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 OR2T2Q6IF00 324 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 CNIH2Q6PI25 160 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 C1QL2Q7Z5L3 287 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 CDH26Q8IXH8 852 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 DMRTC2Q8IXT2 367 aaPredicted RBP8.9□□□□□ -0.98
TPM3-217ENST00000504663 LILRB2Q8N423 598 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 OR6M1Q8NGM8 313 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 ZFAND2BQ8WV99 257 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 ITLN2Q8WWU7 325 aaPredicted RBP8.9□□□□□ -0.98
TPM3-217ENST00000504663 DVL3Q92997 716 aaPredicted RBP8.9□□□□□ -0.98
TPM3-217ENST00000504663 ITFG2Q969R8 447 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 CYYR1Q96J86 154 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 EAF1Q96JC9 268 aaPredicted RBP8.9□□□□□ -0.98
TPM3-217ENST00000504663 WFIKKN1Q96NZ8 548 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 PLEKHA1Q9HB21 404 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 MOV10Q9HCE1 1003 aaKnown RBP8.9□□□□□ -0.98
TPM3-217ENST00000504663 CKLFQ9UBR5 152 aa8.9□□□□□ -0.98
TPM3-217ENST00000504663 ERRFI1Q9UJM3 462 aaPredicted RBP8.9□□□□□ -0.98
TPM3-217ENST00000504663 DIDO1Q9BTC0 2240 aaKnown RBP8.9□□□□□ -0.98
TPM3-217ENST00000504663 UBR5O95071 2799 aaPredicted RBP8.9□□□□□ -0.99
TPM3-217ENST00000504663 PLCE1Q9P212 2302 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 ANKHD1Q8IWZ3 2542 aaKnown RBP8.89□□□□□ -0.99
TPM3-217ENST00000504663 ZNF462Q96JM2 2506 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 HEATR1Q9H583 2144 aaKnown RBP8.89□□□□□ -0.99
TPM3-217ENST00000504663 A0A1B0GUH1 482 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 PQLC2LA1A4F0 135 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 IQCF6A8MYZ5 107 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 B8ZZF3 427 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 CLDN25C9JDP6 229 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 NAT2P11245 290 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 RAC2P15153 192 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 KITLGP21583 273 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 HTR2CP28335 458 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 ALDH3B1P43353 468 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 POU3F4P49335 361 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 EVX1P49640 407 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 SCAND1P57086 179 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 SORDQ00796 357 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 MALLQ13021 153 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 PRDX4Q13162 271 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 RIN1Q13671 783 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 SNTB1Q13884 538 aaKnown RBP8.89□□□□□ -0.99
TPM3-217ENST00000504663 DAZAP2Q15038 168 aaPredicted RBP8.89□□□□□ -0.99
TPM3-217ENST00000504663 RAB11BQ15907 218 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 MBNL2Q5VZF2 373 aaKnown RBP8.89□□□□□ -0.99
TPM3-217ENST00000504663 GLT8D1Q68CQ7 371 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 Q6ZR03 302 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 MRPL21Q7Z2W9 205 aaKnown RBP8.89□□□□□ -0.99
TPM3-217ENST00000504663 WDR86Q86TI4 376 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 SAMD12Q8N8I0 201 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 OR4M1Q8NGD0 313 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 OR51D1Q8NGF3 324 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 OR1J1Q8NGS3 322 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 KLF14Q8TD94 323 aaPredicted RBP8.89□□□□□ -0.99
TPM3-217ENST00000504663 NPRL2Q8WTW4 380 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 TMEM171Q8WVE6 324 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 SPSB1Q96BD6 273 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 FAM3DQ96BQ1 224 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 HAVCR1Q96D42 359 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 CMBLQ96DG6 245 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 ITPKCQ96DU7 683 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 UQCC2Q9BRT2 126 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 SRRQ9GZT4 340 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 CYSLTR2Q9NS75 346 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 FBLN5Q9UBX5 448 aa8.89□□□□□ -0.99
TPM3-217ENST00000504663 IGLV3-9A0A075B6K5 115 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 A0A0A6YYD4 124 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 IGKV1-12A0A0C4DH73 117 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 ZNF850A8MQ14 1090 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 TMEM14DPA8MWL7 114 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 MLNRO43193 412 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 NRASP01111 189 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 IGKV1D-12P01611 117 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 APOA1P02647 267 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 RNF224P0DH78 156 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 VSIG8P0DPA2 414 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 ZNF250P15622 560 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 PPP3CBP16298 524 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 CD40LGP29965 261 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 ZNF93P35789 620 aaPredicted RBP8.88□□□□□ -0.99
TPM3-217ENST00000504663 PSMD7P51665 324 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 SNTB2Q13425 540 aaKnown RBP8.88□□□□□ -0.99
TPM3-217ENST00000504663 KISS1Q15726 138 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 C2orf76Q3KRA6 126 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 UBE2NLQ5JXB2 153 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 ASCL4Q6XD76 172 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 LRP11Q86VZ4 500 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 LRRC28Q86X40 367 aaPredicted RBP8.88□□□□□ -0.99
TPM3-217ENST00000504663 WFDC8Q8IUA0 241 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 SNX29P2Q8IUI4 249 aa8.88□□□□□ -0.99
TPM3-217ENST00000504663 CMTM4Q8IZR5 234 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms