RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 FAM71F1Q96KD3 344 aaPredicted RBP9.91□□□□□ -0.82
MED28-203ENST00000503945 WDFY2Q96P53 400 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 CCL13Q99616 98 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 CTSZQ9UBR2 303 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 TMEM14AQ9Y6G1 99 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 TANC2Q9HCD6 1990 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 CMYA5Q8N3K9 4069 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 CENPVL3A0A0U1RRI6 287 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 TMEM210A6NLX4 147 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 HOXA3O43365 443 aaPredicted RBP9.9□□□□□ -0.82
MED28-203ENST00000503945 ZNF254O75437 659 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 SFTPBP07988 381 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 ESRRGP62508 458 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 PRDX4Q13162 271 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 PTGES3Q15185 160 aaKnown RBP9.9□□□□□ -0.82
MED28-203ENST00000503945 LRRC10Q5BKY1 277 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 FAM76BQ5HYJ3 339 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 Q6YL49 198 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 BBS1Q8NFJ9 593 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 OR5T2Q8NGG2 359 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 OR5K1Q8NHB7 308 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 ZNF671Q8TAW3 534 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 FAM81AQ8TBF8 368 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 ASB17Q8WXJ9 295 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 ITPKCQ96DU7 683 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 MED30Q96HR3 178 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 DMRTB1Q96MA1 342 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 C1orf147Q96MC9 270 aaPredicted RBP9.9□□□□□ -0.82
MED28-203ENST00000503945 PRRG3Q9BZD7 231 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 PRDM13Q9H4Q3 707 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 PPP1R3EQ9H7J1 279 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 SLC25A19Q9HC21 320 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 SMURF1Q9HCE7 757 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 HAO2Q9NYQ3 351 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 DNAJB11Q9UBS4 358 aa9.9□□□□□ -0.82
MED28-203ENST00000503945 TGP01266 2768 aa9.9□□□□□ -0.83
MED28-203ENST00000503945 SRRM5B3KS81 715 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 G3V2T6 193 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 ATP5HO75947 161 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 SLC2A5P22732 501 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 DCTDP32321 178 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 TGM4P49221 684 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 DAPP51397 102 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 GMFBP60983 142 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 CSNK2BP67870 215 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 RIPPLY1Q0D2K3 151 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 CDONQ4KMG0 1287 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 ATPAF1Q5TC12 328 aaPredicted RBP9.89□□□□□ -0.83
MED28-203ENST00000503945 LCN1P1Q5VSP4 162 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 THAP5Q7Z6K1 395 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 WDR86Q86TI4 376 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 ZDHHC23Q8IYP9 409 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 CMTM4Q8IZR5 234 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 SCCPDHQ8NBX0 429 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 OR10Z1Q8NGY1 313 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 TBC1D15Q8TC07 691 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 RPL3LQ92901 407 aaKnown RBP9.89□□□□□ -0.83
MED28-203ENST00000503945 LHX4Q969G2 390 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 UTP4Q969X6 686 aaKnown RBP9.89□□□□□ -0.83
MED28-203ENST00000503945 TMIGD2Q96BF3 282 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 PKP2Q99959 881 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 CADM1Q9BY67 442 aaKnown RBP9.89□□□□□ -0.83
MED28-203ENST00000503945 TLNRD1Q9H1K6 362 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 ACOXLQ9NUZ1 547 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 FAM53CQ9NYF3 392 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 RPUSD1Q9UJJ7 312 aaKnown RBP9.89□□□□□ -0.83
MED28-203ENST00000503945 LRP12Q9Y561 859 aa9.89□□□□□ -0.83
MED28-203ENST00000503945 DOCK11Q5JSL3 2073 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 A0A0U1RQV5 110 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 ZNF816-ZNF321PA0A0X1KG74 233 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 PSMD9O00233 223 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 MTRF1O75570 445 aaKnown RBP9.88□□□□□ -0.83
MED28-203ENST00000503945 MMP9P14780 707 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 ATP6V1B1P15313 513 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 ACKR3P25106 362 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 PSMA6P60900 246 aaKnown RBP9.88□□□□□ -0.83
MED28-203ENST00000503945 DEFA6Q01524 100 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 BNIP1Q12981 228 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 IKZF1Q13422 519 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 CEACAM21Q3KPI0 293 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 PDLIM3Q53GG5 364 aaPredicted RBP9.88□□□□□ -0.83
MED28-203ENST00000503945 WDR38Q5JTN6 314 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 FAHD1Q6P587 224 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 MEPCEQ7L2J0 689 aaKnown RBP9.88□□□□□ -0.83
MED28-203ENST00000503945 COMMD2Q86X83 199 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 ZNF679Q8IYX0 411 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 OR8B12Q8NGG6 310 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 OR5A2Q8NGI9 324 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 TAF15Q92804 592 aaKnown RBP eCLIP9.88□□□□□ -0.83
MED28-203ENST00000503945 SEH1LQ96EE3 360 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 LYZL4Q96KX0 146 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 TBX15Q96SF7 602 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 PBOV1Q9GZY1 135 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 DNTTIP1Q9H147 329 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 UNKLQ9H9P5 680 aaKnown RBP9.88□□□□□ -0.83
MED28-203ENST00000503945 KRT84Q9NSB2 600 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 SNTG1Q9NSN8 517 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 KLHDC2Q9Y2U9 406 aa9.88□□□□□ -0.83
MED28-203ENST00000503945 FAM96BQ9Y3D0 163 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms