RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CDH24Q86UP0 819 aa19.06■□□□□ 0.64
PTPN13-205ENST00000502971 PIGTQ969N2 578 aa19.06■□□□□ 0.64
PTPN13-205ENST00000502971 CST11Q9H112 138 aa19.06■□□□□ 0.64
PTPN13-205ENST00000502971 A0A0B4J293 547 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 ZNF816-ZNF321PA0A0X1KG74 233 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 MBD3L4A6NDZ8 208 aaPredicted RBP19.05■□□□□ 0.64
PTPN13-205ENST00000502971 MBD3L3A6NE82 208 aaPredicted RBP19.05■□□□□ 0.64
PTPN13-205ENST00000502971 MBD3L5A6NJ08 208 aaPredicted RBP19.05■□□□□ 0.64
PTPN13-205ENST00000502971 PTGER4P35408 488 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 FAUP35544 74 aaKnown RBP19.05■□□□□ 0.64
PTPN13-205ENST00000502971 ACTBP60709 375 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 ACTG1P63261 375 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 GUCA2AQ02747 115 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 PCGF3Q3KNV8 242 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 ZNF260Q3ZCT1 412 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 MDP1Q86V88 176 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 MBD3L2Q8NHZ7 208 aaPredicted RBP19.05■□□□□ 0.64
PTPN13-205ENST00000502971 TNFAIP8L1Q8WVP5 186 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 AQP3Q92482 292 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 SEH1LQ96EE3 360 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 BOD1Q96IK1 185 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 REPIN1Q9BWE0 567 aaKnown RBP19.05■□□□□ 0.64
PTPN13-205ENST00000502971 LPAR5Q9H1C0 372 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 OPA3Q9H6K4 179 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 PLSCR4Q9NRQ2 329 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 KCNN3Q9UGI6 736 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 ING4Q9UNL4 249 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 HMX3A6NHT5 357 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 WDR1O75083 606 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 CCL2P13500 99 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 UBE2NP61088 152 aaKnown RBP19.05■□□□□ 0.64
PTPN13-205ENST00000502971 LHFPL2Q6ZUX7 228 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 BTN2A1Q7KYR7 527 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 OR10R2Q8NGX6 335 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 ZNF75AQ96N20 296 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 S100A13Q99584 98 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 URM1Q9BTM9 101 aaKnown RBP19.05■□□□□ 0.64
PTPN13-205ENST00000502971 TMEM59Q9BXS4 323 aa19.05■□□□□ 0.64
PTPN13-205ENST00000502971 MPIG6BO95866 241 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 MELTFP08582 738 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 CCR6P51684 374 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 RAG2P55895 527 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 MTCP1P56278 107 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 CD300CQ08708 224 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 DMRTC1Q5HYR2 192 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 VWA1Q6PCB0 445 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 FAM180AQ6UWF9 173 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 TMEM104Q8NE00 496 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 C1orf162Q8NEQ5 155 aaPredicted RBP19.04■□□□□ 0.64
PTPN13-205ENST00000502971 UBASH3BQ8TF42 649 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 ACTR6Q9GZN1 396 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 TP53TG5Q9Y2B4 290 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 ALG5Q9Y673 324 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 RTTNQ86VV8 2226 aa19.04■□□□□ 0.64
PTPN13-205ENST00000502971 CRTAPO75718 401 aaPredicted RBP19.03■□□□□ 0.64
PTPN13-205ENST00000502971 DHFRP00374 187 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 CRHP06850 196 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 COX5AP20674 150 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 VEGFCP49767 419 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 GK2Q14410 553 aaPredicted RBP19.03■□□□□ 0.64
PTPN13-205ENST00000502971 GABRA6Q16445 453 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 Q6ZTK2 550 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 CHST4Q8NCG5 386 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 OR5D18Q8NGL1 313 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 EXTL1Q92935 676 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 BORCS8Q96FH0 119 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 NUDT15Q9NV35 164 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 ZNF107Q9UII5 783 aaPredicted RBP19.03■□□□□ 0.64
PTPN13-205ENST00000502971 TUBD1Q9UJT1 453 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 SLC7A11Q9UPY5 501 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 RAD51DO75771 328 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 RBP2P50120 134 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 FUT6P51993 359 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 PER3P56645 1201 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 ZP1P60852 638 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 FOXF2Q12947 444 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 EIF2S3LQ2VIR3 472 aaKnown RBP19.03■□□□□ 0.64
PTPN13-205ENST00000502971 CDNFQ49AH0 187 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 SLC22A6Q4U2R8 563 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 MRPL21Q7Z2W9 205 aaKnown RBP19.03■□□□□ 0.64
PTPN13-205ENST00000502971 SLC30A7Q8NEW0 376 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 OR56B1Q8NGI3 324 aa19.03■□□□□ 0.64
PTPN13-205ENST00000502971 MGAQ8IWI9 3026 aa19.02■□□□□ 0.64
PTPN13-205ENST00000502971 FAM230AA0A1W2PPH8 454 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 WIPF3A6NGB9 483 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 J3QW42 95 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 TNFSF13O75888 250 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 CCNKO75909 580 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 LYZL6O75951 148 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 PRSS12P56730 875 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 TBC1D28Q2M2D7 210 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 TMEM255AQ5JRV8 349 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 SFRP4Q6FHJ7 346 aaPredicted RBP19.02■□□□□ 0.63
PTPN13-205ENST00000502971 C1QL2Q7Z5L3 287 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 STEAP2Q8NFT2 490 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 PIGCQ92535 297 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 RNF170Q96K19 258 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 BANF2Q9H503 90 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 PROCRQ9UNN8 238 aa19.02■□□□□ 0.63
PTPN13-205ENST00000502971 STARD10Q9Y365 291 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms