RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 PARP16Q8N5Y8 322 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 NPRL2Q8WTW4 380 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 TSEN15Q8WW01 171 aaKnown RBP9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 TMEM106AQ96A25 262 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 SPG11Q96JI7 2443 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 CHCHD6Q9BRQ6 235 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 CENPOQ9BU64 300 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 TPK1Q9H3S4 243 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 OPA3Q9H6K4 179 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 CBLN4Q9NTU7 201 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 TMEM100Q9NV29 134 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 TXNL4BQ9NX01 149 aaKnown RBP9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 SCOCQ9UIL1 159 aa9.18□□□□□ -0.94
GPATCH4-210ENST00000498756 ARFGEF3Q5TH69 2177 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 IGKV1-27A0A075B6S5 117 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 TRDV1A0A1B0GX56 115 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 C17orf100A8MU93 164 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 VSTM5A8MXK1 200 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 OVOL3O00110 214 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 MTRF1O75570 445 aaKnown RBP9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 RGS9O75916 674 aaPredicted RBP9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 NCR1O76036 304 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 LY6HO94772 140 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 NRASP01111 189 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 UCHL1P09936 223 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 GNALP38405 381 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 PMELP40967 661 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 ZNF81P51508 661 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 BLMHQ13867 455 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 CLVS2Q5SYC1 327 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 GPR107Q5VW38 600 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 C22orf42Q6IC83 251 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 ZNF529Q6P280 563 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 LRRTM1Q86UE6 522 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 C11orf53Q8IXP5 236 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 CSNK2A3Q8NEV1 391 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 OR2Z1Q8NG97 314 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 OR13C9Q8NGT0 318 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 OR5P3Q8WZ94 311 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 ITPKCQ96DU7 683 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 SPACA5Q96QH8 159 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 GFI1Q99684 422 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 PAPOLGQ9BWT3 736 aaKnown RBP9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 CACNG6Q9BXT2 260 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 VCX3AQ9NNX9 186 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 MRPL15Q9P015 296 aaKnown RBP9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 ENPP5Q9UJA9 477 aa9.17□□□□□ -0.94
GPATCH4-210ENST00000498756 DHRS7CA6NNS2 312 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 ANKRD30BLA7E2S9 258 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 LYNX1G3V0Z9 82 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 HPXP02790 462 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 CLEC2LP0C7M8 214 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 LYNX1P0DP58 116 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 ZNF20P17024 532 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 ATF1P18846 271 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 SELENOVP59797 346 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 OR8G1Q15617 311 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 MPPED2Q15777 294 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 ZBTB37Q5TC79 503 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 AGAP6Q5VW22 663 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 PRAMEF6Q5VXH4 476 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 SERPINA12Q8IW75 414 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 CCDC54Q8NEL0 328 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 DNAAF1Q8NEP3 725 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 OR1M1Q8NGA1 313 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 OR52N4Q8NGI2 321 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 OR13G1Q8NGZ3 307 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 TRMT10AQ8TBZ6 339 aaKnown RBP9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 PIGTQ969N2 578 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 SORCS2Q96PQ0 1159 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 VRK1Q99986 396 aaPredicted RBP9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 CHST5Q9GZS9 411 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 ZCCHC4Q9H5U6 513 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 EXOSC4Q9NPD3 245 aaKnown RBP9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 DCAF16Q9NXF7 216 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 TREM2Q9NZC2 230 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 STUB1Q9UNE7 303 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 CACNG2Q9Y698 323 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 CEPT1Q9Y6K0 416 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 USF3Q68DE3 2245 aa9.16□□□□□ -0.94
GPATCH4-210ENST00000498756 LOC100506127A0A0U1RQW1 187 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 SMIM30A4D0T7 59 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 DPPA5A6NC42 116 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 ZNF732B4DXR9 585 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 M0R233 179 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 GATBO75879 557 aaKnown RBP9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 MAS1P04201 325 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 ZNF12P17014 697 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 SRMP19623 302 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 COL8A2P25067 703 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 PSMA1P25786 263 aaKnown RBP9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 FGF9P31371 208 aaPredicted RBP9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 NCS1P62166 190 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 CCL8P80075 99 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 TRAM1Q15629 374 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 CTF1Q16619 201 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 CEACAM21Q3KPI0 293 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 PLCXD3Q63HM9 321 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 ZNF826PQ6ZT77 177 aa9.15□□□□□ -0.94
GPATCH4-210ENST00000498756 UTS2BQ765I0 119 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms