RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 PCBD1P61457 104 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 LSM6P62312 80 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 SNRPD2P62316 118 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 ZNF91Q05481 1191 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 GABRA6Q16445 453 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 TBRG1Q3YBR2 411 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 LINC01590Q5TEZ4 76 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 FAM27BQ5VT28 67 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 CD276Q5ZPR3 534 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 OR7E24Q6IFN5 339 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 LAIR2Q6ISS4 152 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 TMEM53Q6P2H8 277 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 KLHL24Q6TFL4 600 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 ZNF627Q7L945 461 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 BHLHA15Q7RTS1 189 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 SLC16A14Q7RTX9 510 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 SLC16A9Q7RTY1 509 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 DPPA2Q7Z7J5 298 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 ZNF575Q86XF7 245 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 ERI1Q8IV48 349 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 SBSPONQ8IVN8 264 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 SLC35F2Q8IXU6 374 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 CCDC36Q8IYA8 594 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 STX19Q8N4C7 294 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 SLC22A24Q8N4F4 322 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 ZNF433Q8N7K0 673 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 ZSCAN4Q8NAM6 433 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 C1orf162Q8NEQ5 155 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 SLC26A10Q8NG04 563 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 OR51G2Q8NGK0 314 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 OR6N2Q8NGY6 317 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 OR2AJ1Q8NGZ0 328 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 ZNRF4Q8WWF5 429 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 IPCEF1Q8WWN9 437 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 GGHQ92820 318 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 BCL2L2Q92843 193 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 MYDGFQ969H8 173 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 NABP1Q96AH0 204 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 MYCBPQ99417 103 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 CNN2Q99439 309 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 MNTQ99583 582 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 SH3GL3Q99963 347 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 WACQ9BTA9 647 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 YIPF3Q9GZM5 350 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 NELFAQ9H3P2 528 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 RNF121Q9H920 327 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 AMBNQ9NP70 447 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 EMC7Q9NPA0 242 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 CCNB1IP1Q9NPC3 277 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 SLC17A5Q9NRA2 495 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 MRPS18AQ9NVS2 196 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 MRPL22Q9NWU5 206 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 HAO2Q9NYQ3 351 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 UBAP1Q9NZ09 502 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 CNOT2Q9NZN8 540 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 PSORS1C1Q9UIG5 152 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 BLOC1S6Q9UL45 172 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 EXOGQ9Y2C4 368 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 MYRFQ9Y2G1 1151 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 TPRKBQ9Y3C4 175 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 TMEM14AQ9Y6G1 99 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 ARPC4-TTLL3A0A0A6YYG9 625 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 DAPL1A0PJW8 107 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 PTGES3LE9PB15 166 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 ZNF670-ZNF695F2Z2N8 137 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 PHYHO14832 338 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 GPR137BO60478 399 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 RAD51DO75771 328 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 UBL3O95164 117 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 APOL3O95236 402 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 RAB36O95755 333 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 PLA2G1BP04054 148 aaKnown RBP4.29□□□□□ -1.72
FXN-205ENST00000498653 SBK2P0C263 348 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 OR2T7P0C7T2 308 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 IGHV4-38-2P0DP08 117 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 CD79AP11912 226 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 PIPP12273 146 aaPredicted RBP4.29□□□□□ -1.72
FXN-205ENST00000498653 PAX7P23759 505 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 EEF1B2P24534 225 aaKnown RBP4.29□□□□□ -1.72
FXN-205ENST00000498653 CD40P25942 277 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 ARR3P36575 388 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 SLC15A1P46059 708 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 CAPZA2P47755 286 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 IDH3GP51553 393 aaPredicted RBP4.29□□□□□ -1.72
FXN-205ENST00000498653 GABARAPL2P60520 117 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 ACTC1P68032 377 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 ACTA1P68133 377 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 SCRN3Q0VDG4 424 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 ST3GAL4Q11206 333 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 RAB40BQ12829 278 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 AQP6Q13520 282 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 EIF2B1Q14232 305 aaKnown RBP4.29□□□□□ -1.72
FXN-205ENST00000498653 ENDOGQ14249 297 aaKnown RBP4.29□□□□□ -1.72
FXN-205ENST00000498653 PPA1Q15181 289 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 MEP1BQ16820 701 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 NSUN5P1Q3KNT7 163 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 SLC36A2Q495M3 483 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 HIKESHIQ53FT3 197 aa4.29□□□□□ -1.72
FXN-205ENST00000498653 TEX30Q5JUR7 227 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms