RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 GALNT4Q8N4A0 578 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 PNLDC1Q8NA58 520 aaKnown RBP7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 FAM81AQ8TBF8 368 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 ST8SIA4Q92187 359 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 PIGCQ92535 297 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 SLC25A28Q96A46 364 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 C1orf147Q96MC9 270 aaPredicted RBP7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 PKP2Q99959 881 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 TTTY10Q9BZA0 68 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 TLNRD1Q9H1K6 362 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 RASSF4Q9H2L5 321 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 H2AFY2Q9P0M6 372 aaPredicted RBP7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 TMEM14AQ9Y6G1 99 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 FBN3Q75N90 2809 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 STAB1Q9NY15 2570 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 A0A0U1RQV5 110 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 ZNF816-ZNF321PA0A0X1KG74 233 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 MDFIC2A0A1B0GVS7 189 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 TMEM269A0A1B0GVZ9 245 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 ACOD1A6NK06 481 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 SRRM5B3KS81 715 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 P2RY10O00398 339 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 PRKYO43930 277 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 MITFO75030 526 aaPredicted RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 ZNF254O75437 659 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 FCN3O75636 299 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 ECDO95905 644 aaPredicted RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 SFTPBP07988 381 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 RNASE1P07998 156 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 HKR1P10072 659 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 MMP9P14780 707 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 FASP25445 335 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 DCTDP32321 178 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 MAP2K3P46734 347 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 RIDAP52758 137 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 BPIFB3P59826 476 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 C11orf91Q3C1V1 193 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 ZNF829Q3KNS6 432 aaPredicted RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 WDR38Q5JTN6 314 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 C1orf146Q5VVC0 180 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 SLX4IPQ5VYV7 408 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 NXNL2Q5VZ03 156 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 MEPCEQ7L2J0 689 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 SLC36A1Q7Z2H8 476 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 COMMD2Q86X83 199 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 ZDHHC13Q8IUH4 622 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 ZDHHC23Q8IYP9 409 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 ZNF679Q8IYX0 411 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 TCEANCQ8N8B7 351 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 SCCPDHQ8NBX0 429 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 OR10Z1Q8NGY1 313 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 HPSE2Q8WWQ2 592 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 ASB17Q8WXJ9 295 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 OR5P3Q8WZ94 311 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 RPL3LQ92901 407 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 C12orf43Q96C57 262 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 RNF170Q96K19 258 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 WDFY2Q96P53 400 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 HIST1H2AAQ96QV6 131 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 OR8B4Q96RC9 309 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 CNN2Q99439 309 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 CCL13Q99616 98 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 FAM206AQ9NX38 181 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 DNAJB11Q9UBS4 358 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 IKZF2Q9UKS7 526 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 COPS3Q9UNS2 423 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 AP4S1Q9Y587 144 aa7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 SOX21Q9Y651 276 aaPredicted RBP7.02□□□□□ -1.29
HMGXB4-207ENST00000498212 A0A1B0GW55 424 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 SLC22A31A6NKX4 558 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 ZAR1LA6NP61 321 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 PRR32B1ATL7 298 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 ZNF670-ZNF695F2Z2N8 137 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 CLDN34H7C241 214 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 M0R129 80 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 NDUFB3O43676 98 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 DUX4L2P0CJ85 424 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 DUX4L3P0CJ86 424 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 DUX4L4P0CJ87 422 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 DUX4L5P0CJ88 424 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 DUX4L6P0CJ89 424 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 DUX4L7P0CJ90 424 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 FCGR1AP12314 374 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 ATP6V1B1P15313 513 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 GPM6AP51674 278 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 GMFBP60983 142 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 CXCR4P61073 352 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 ACTR3P61158 418 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 ARF6P62330 175 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 ELF3P78545 371 aaPredicted RBP7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 EFNB1P98172 346 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 ROM1Q03395 351 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 PDCD1Q15116 288 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 SLC9A3R2Q15599 337 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 DEFB112Q30KQ8 113 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 FAM76BQ5HYJ3 339 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 AADACL4Q5VUY2 407 aa7.01□□□□□ -1.29
HMGXB4-207ENST00000498212 RUSC1-AS1Q66K80 236 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms