RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 RIDAP52758 137 aaKnown RBP18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 RAB40BQ12829 278 aa18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 MAB21L1Q13394 359 aa18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 ZNF404Q494X3 552 aa18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 KLHL22Q53GT1 634 aa18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 OR52H1Q8NGJ2 320 aa18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 MYCBPQ99417 103 aaPredicted RBP18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 TTTY10Q9BZA0 68 aa18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 MRPS18AQ9NVS2 196 aaKnown RBP18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 SOX21Q9Y651 276 aaPredicted RBP18.84■□□□□ 0.61
CDKN2A-208ENST00000498124 IGHV2-70DA0A0C4DH43 119 aa18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 SPRY1O43609 319 aaPredicted RBP18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 FADS2O95864 444 aaKnown RBP18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 KRT8P05787 483 aa18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 SLC2A1P11166 492 aa18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 CPT2P23786 658 aa18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 PRTN3P24158 256 aa18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 ZNF121P58317 390 aaPredicted RBP18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 PSMA6P60900 246 aaKnown RBP18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 SMN1Q16637 294 aaKnown RBP18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 ACBD7Q8N6N7 88 aa18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 TMEM100Q9NV29 134 aa18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 N6AMT1Q9Y5N5 214 aa18.83■□□□□ 0.6
CDKN2A-208ENST00000498124 IRGMA1A4Y4 181 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 ACOD1A6NK06 481 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 PRR32B1ATL7 298 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 J3QRE1 110 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 PSMD9O00233 223 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 PPIAL4GP0DN37 164 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 HOXA4Q00056 320 aaPredicted RBP18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 ZNF829Q3KNS6 432 aaPredicted RBP18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 SNAI3Q3KNW1 292 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 RBMS3Q6XE24 437 aaKnown RBP18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 C9orf139Q6ZV77 190 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 FAM57BQ71RH2 274 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 SGMS2Q8NHU3 365 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 FBLIM1Q8WUP2 373 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 UPRTQ96BW1 309 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 MRPL48Q96GC5 212 aaKnown RBP18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 PGAM5Q96HS1 289 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 OR10A2Q9H208 303 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 MIOXQ9UGB7 285 aa18.82■□□□□ 0.6
CDKN2A-208ENST00000498124 IGHV3OR16-10A0A075B7F0 116 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 DAPL1A0PJW8 107 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 TBX1O43435 398 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 XRCC2O43543 280 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 SULT1C4O75897 302 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 CD200P41217 278 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 ZNF85Q03923 595 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 PLEKHG7Q6ZR37 379 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 SSX6Q7RTT6 188 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 PRSS45Q7RTY3 260 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 MRPL21Q7Z2W9 205 aaKnown RBP18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 Q8TCH9 128 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 NEIL1Q96FI4 390 aaPredicted RBP18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 OPA3Q9H6K4 179 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 BRD7Q9NPI1 651 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 INPP5EQ9NRR6 644 aa18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 MRM2Q9UI43 246 aaKnown RBP18.81■□□□□ 0.6
CDKN2A-208ENST00000498124 TMEM269A0A1B0GVZ9 245 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 C5orf63A6NC05 138 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 METTL15A6NJ78 407 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 LRRC30A6NM36 301 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 PLATP00750 562 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 GNB2P62879 340 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 TIGD6Q17RP2 521 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 GLYATL3Q5SZD4 288 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 PRAMEF6Q5VXH4 476 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 LYPD2Q6UXB3 125 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 PGAP1Q75T13 922 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 FAM220AQ7Z4H9 259 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 CELF2-AS1Q8N7Q2 184 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 YIPF7Q8N8F6 280 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 OR52I1Q8NGK6 324 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 RAB40AQ8WXH6 277 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 ZNF747Q9BV97 191 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 ANKRD60Q9BZ19 345 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 RASSF4Q9H2L5 321 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 RGCCQ9H4X1 137 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 ZMAT3Q9HA38 289 aaKnown RBP18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 CMYA5Q8N3K9 4069 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 DOCK11Q5JSL3 2073 aa18.8■□□□□ 0.6
CDKN2A-208ENST00000498124 MAGEB4O15481 346 aaPredicted RBP18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 FAM20BO75063 409 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 IGHA1P01876 353 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 RNASE1P07998 156 aaKnown RBP18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 CFL1P23528 166 aaKnown RBP18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 PITPNBP48739 271 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 BAMBIQ13145 260 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 MPPED2Q15777 294 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 SNCBQ16143 134 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 ZNF684Q5T5D7 378 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 ZNF841Q6ZN19 808 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 KCTD20Q7Z5Y7 419 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 C1orf87Q8N0U7 546 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 C19orf18Q8NEA5 215 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 FGF20Q9NP95 211 aaPredicted RBP18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 RAB26Q9ULW5 256 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 MYRFQ9Y2G1 1151 aa18.79■□□□□ 0.6
CDKN2A-208ENST00000498124 R4GMQ9 66 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms