RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SLC25A31Q9H0C2 315 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 MMP25Q9NPA2 562 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 SERINC4A6NH21 518 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 C17orf51A8MQB3 221 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 CXCR1P25024 350 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 ZNF880Q6PDB4 577 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 CPEB2Q7Z5Q1 589 aaKnown RBP11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 KLHDC3Q9BQ90 382 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 OR52A1Q9UKL2 312 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 DOCK8Q8NF50 2099 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 ELOA3CA0A087WX78 387 aaPredicted RBP11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 OTOL1A6NHN0 477 aaPredicted RBP11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 ZNF724A8MTY0 619 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 CRTAPO75718 401 aaPredicted RBP11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 MPZP25189 248 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 CD200P41217 278 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 ALDH3B1P43353 468 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 DPTQ07507 201 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 C1orf189Q5VU69 101 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 GLIPR1L1Q6UWM5 242 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 OR14C36Q8NHC7 312 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 LRRC3BQ96PB8 259 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 SLC5A6Q9Y289 635 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 HIF3AQ9Y2N7 669 aa11.6□□□□□ -0.55
GAPVD1-220ENST00000497580 BCAT2O15382 392 aaPredicted RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 CTLA4P16410 223 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 FCARP24071 287 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 THBS4P35443 961 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 RPS4XP62701 263 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 LINC00114Q6XXX2 140 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 NECAP1Q8NC96 275 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 ADAM19Q9H013 955 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 METTL9Q9H1A3 318 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 Q9N2J8 555 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 ZNF107Q9UII5 783 aaPredicted RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 GAB2Q9UQC2 676 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 B3GALT1Q9Y5Z6 326 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 MAP1BP46821 2468 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 RBFOX3A6NFN3 312 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 NUDT21O43809 227 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 PGA3P0DJD8 388 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 CEBPBP17676 345 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 P2RY2P41231 377 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 RPL29P47914 159 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 SNU13P55769 128 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 TLE1Q04724 770 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 SLC10A1Q14973 349 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 DEFB110Q30KQ9 67 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 FBXO42Q6P3S6 717 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 SGPP2Q8IWX5 399 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 METTL27Q8N6F8 245 aaPredicted RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 OR2G3Q8NGZ4 309 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 DTD1Q8TEA8 209 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 HAS2Q92819 552 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 ARHGAP5-AS1Q96IT6 56 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 RAB11FIP5Q9BXF6 653 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 TPSD1Q9BZJ3 242 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 COA3Q9Y2R0 106 aaPredicted RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 LDLRAD4O15165 306 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 NKX2-2O95096 273 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 SLC2A1P11166 492 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 FPR2P25090 351 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 PTGER4P35408 488 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 PPM1AP35813 382 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 SGCGQ13326 291 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 CHRFAM7AQ494W8 412 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 LBHQ53QV2 105 aaPredicted RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 DCXRQ7Z4W1 244 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 COMMD1Q8N668 190 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 M1APQ8TC57 530 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 SCARF2Q96GP6 870 aaPredicted RBP11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 SCGB3A2Q96PL1 93 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 GAL3ST4Q96RP7 486 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 SCRT1Q9BWW7 348 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 SNHG12Q9BXW3 62 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 GPR87Q9BY21 358 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 C1orf123Q9NWV4 160 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 B3GALT5Q9Y2C3 310 aa11.59□□□□□ -0.55
GAPVD1-220ENST00000497580 MED12Q93074 2177 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 C9J4A7 227 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 SYT7O43581 403 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 GZMBP10144 247 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 MMP9P14780 707 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF823P16415 610 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF10P21506 573 aaPredicted RBP11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 RPS15AP62244 130 aaKnown RBP11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 C2orf27AQ580R0 203 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 TSPO2Q5TGU0 170 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF765Q7L2R6 523 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 SUMF1Q8NBK3 374 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 RERGQ96A58 199 aaPredicted RBP11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 GOLT1BQ9Y3E0 138 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 FAM221AA4D161 298 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 MASP2O00187 686 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 DEDDO75618 318 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 RAD51DO75771 328 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms