RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TRAM2Q15035 370 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 ZBTB6Q15916 424 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 TRIM16LQ309B1 348 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 TFDP3Q5H9I0 405 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 TPRG1LQ5T0D9 272 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 PVRIGQ6DKI7 326 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 CD300LGQ6UXG3 332 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 SLC35F6Q8N357 371 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 NOXO1Q8NFA2 376 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 OR1S2Q8NGQ3 325 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 CAPSLQ8WWF8 208 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 ACOT11Q8WXI4 607 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 TFGQ92734 400 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 UFD1Q92890 307 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 SLC35E1Q96K37 410 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 SERPINB11Q96P15 392 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 PARD6GQ9BYG4 376 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 MRPS26Q9BYN8 205 aaKnown RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 LHX5Q9H2C1 402 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 WDR54Q9H977 334 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 RSL24D1Q9UHA3 163 aaKnown RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 ERGIC3Q9Y282 383 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 YARS2Q9Y2Z4 477 aaKnown RBP3.5□□□□□ -1.85
SF3B1-212ENST00000496458 NACAE9PAV3 2078 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 TIAM2Q8IVF5 1701 aa3.5□□□□□ -1.85
SF3B1-212ENST00000496458 COL4A5P29400 1685 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 IGHV1OR15-1A0A075B7D0 117 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 OR5B21A6NL26 309 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 PP2D1A8MPX8 630 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 LAD1O00515 517 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 GOSR2O14653 212 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 PRMT5O14744 637 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-212ENST00000496458 CCDC22O60826 627 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 PSIP1O75475 530 aaKnown RBP3.49□□□□□ -1.85
SF3B1-212ENST00000496458 LDOC1O95751 146 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-212ENST00000496458 GFAPP14136 432 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 PGAM1P18669 254 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 FGF9P31371 208 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-212ENST00000496458 TALDO1P37837 337 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 HCAR3P49019 387 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 CDK9P50750 372 aaKnown RBP3.49□□□□□ -1.85
SF3B1-212ENST00000496458 FBXW4P57775 412 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 GPX6P59796 221 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 MYL5Q02045 173 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 CHRNB3Q05901 458 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 BAMBIQ13145 260 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 POU6F1Q14863 301 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 PGGHGQ32M88 737 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 COQ5Q5HYK3 327 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 DUPD1Q68J44 220 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 CLEC18BQ6UXF7 455 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 CRLF3Q8IUI8 442 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 SKA3Q8IX90 412 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 CDRT4Q8N9R6 151 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 OR5T1Q8NG75 326 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 PHOSPHO2Q8TCD6 241 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 C7orf33Q8WU49 177 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 BAALCQ8WXS3 180 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 RPEQ96AT9 228 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 TLCD1Q96CP7 247 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 PDXPQ96GD0 296 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 TMEM101Q96IK0 257 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 SERPINB12Q96P63 405 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 OXGR1Q96P68 337 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 FAIM2Q9BWQ8 316 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 DERL2Q9GZP9 239 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 PATZ1Q9HBE1 687 aaKnown RBP3.49□□□□□ -1.85
SF3B1-212ENST00000496458 LSM7Q9UK45 103 aaKnown RBP3.49□□□□□ -1.85
SF3B1-212ENST00000496458 RAB26Q9ULW5 256 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 COPS3Q9UNS2 423 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 KCNIP3Q9Y2W7 256 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 V9GYY9 64 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 LRRC37AA6NMS7 1700 aa3.49□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF532Q9HCE3 1301 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 CEP290O15078 2479 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 LTBP1Q14766 1721 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 DUOX1Q9NRD9 1551 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 IGLV3-16A0A075B6K0 115 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 A0A0J9YXY3 114 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 FAM25AB3EWG3 89 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 FAM25CB3EWG5 89 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 FAM25GB3EWG6 89 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 ATP6V1G2-DDX39BF2Z307 99 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 CLDN34H7C241 214 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 GFYI3L273 518 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 hCG_2039718K7EN88 272 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 PRKYO43930 277 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 CIAO1O76071 339 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 LGALS2P05162 132 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 IL6P05231 212 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 TACSTD2P09758 323 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 TFPTP0C1Z6 253 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 SLC35E2BP0CK96 405 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 ICAM2P13598 275 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 PSMC3P17980 439 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 SERPINA2P20848 420 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 KDELR2P33947 212 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 EPHX2P34913 555 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 UGT2B10P36537 528 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 PPP1R2P41236 205 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms