RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	IL34	Q6ZMJ4	242 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FBLN5	Q9UBX5	448 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LSM5	Q9Y4Y9	91 aa	Known RBP	11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TRIO	O75962	3097 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR2J2	O76002	312 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NFYB	P25208	207 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CLDN17	P56750	224 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SMRP1	Q8NCR6	262 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PIGT	Q969N2	578 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZFP57	Q9NU63	452 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RALGAPA1	Q6GYQ0	2036 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	C10orf142	B7Z368	130 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MFNG	O00587	321 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CSTB	P04080	98 aa	Known RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RCC1	P18754	421 aa	Predicted RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CD80	P33681	288 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PTGFR	P43088	359 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SUPT4H1	P63272	117 aa	Known RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	STK11	Q15831	433 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PRAMEF20	Q5VT98	475 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FNDC9	Q8TBE3	224 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PARP12	Q9H0J9	701 aa	Known RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SLC26A1	Q9H2B4	701 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	BIN3	Q9NQY0	253 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	KLHL13	Q9P2N7	655 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071		K7EPK0	472 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	IFNA21	P01568	189 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MUC1	P15941	1255 aa	Predicted RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FAH	P16930	419 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RAB13	P51153	203 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NXPH1	P58417	271 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RBM39	Q14498	530 aa	Known RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PLPPR5	Q32ZL2	321 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	C1QL2	Q7Z5L3	287 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SULF2	Q8IWU5	870 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LRRC18	Q8N456	261 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FAM71E2	Q8N5Q1	922 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	EMG1	Q92979	244 aa	Known RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZC3H10	Q96K80	434 aa	Known RBP	11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OCSTAMP	Q9BR26	566 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SEC11C	Q9BY50	192 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TMEM100	Q9NV29	134 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PLEKHJ1	Q9NW61	149 aa		11.84	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SHISA7	A6NL88	538 aa		11.83	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RAMP1	O60894	148 aa		11.83	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FOSL2	P15408	326 aa		11.83	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZNF529	Q6P280	563 aa		11.83	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NAXE	Q8NCW5	288 aa		11.83	□□□□□ -0.51
SUPT20H-222	ENST00000495071	C12orf57	Q99622	126 aa		11.83	□□□□□ -0.51
SUPT20H-222	ENST00000495071	WDR87	Q6ZQQ6	2873 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071		A0A1W2PNV4	684 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	ZNF98	A6NK75	572 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	ADAM10	O14672	748 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	TRAF3IP2	O43734	574 aa	Predicted RBP	11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	IFNA2	P01563	188 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	GLB1	P16278	677 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	P2RY4	P51582	365 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	SMAD4	Q13485	552 aa	Known RBP	11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	AVPI1	Q5T686	147 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	SGPP2	Q8IWX5	399 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	NUBPL	Q8TB37	319 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	C1orf147	Q96MC9	270 aa	Predicted RBP	11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	AQP10	Q96PS8	301 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	NRIP2	Q9BQI9	281 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	SULT4A1	Q9BR01	284 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	C1orf123	Q9NWV4	160 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	ZNF814	B7Z6K7	855 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	ANOS1	P23352	680 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	MSX1	P28360	303 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	GRB2	P62993	217 aa	Known RBP	11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	PEA15	Q15121	130 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	TOMM40L	Q969M1	308 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	OR6C1	Q96RD1	312 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	CMSS1	Q9BQ75	279 aa	Known RBP	11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	CRB3	Q9BUF7	120 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	DEFB126	Q9BYW3	111 aa		11.83	□□□□□ -0.52
SUPT20H-222	ENST00000495071	IGKV1-9	A0A0C4DH69	117 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	RNASEK-C17orf49	H0YIS7	233 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	ZFAND5	O76080	213 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	HPN	P05981	417 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	SFTA3	P0C7M3	94 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	FAM157C	P0CG43	387 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	TMEM225B	P0DP42	221 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	RPL12	P30050	165 aa	Known RBP	11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	ECH1	Q13011	328 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	OXGR1	Q96P68	337 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	RBM24	Q9BX46	236 aa	Known RBP	11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	FBXO9	Q9UK97	447 aa	Predicted RBP	11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	CPT2	P23786	658 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	RFC3	P40938	356 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	AADACL3	Q5VUY0	350 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	C6orf201	Q7Z4U5	140 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	OR6X1	Q8NH79	312 aa		11.82	□□□□□ -0.52
SUPT20H-222	ENST00000495071	PECR	Q9BY49	303 aa		11.82	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms