RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 MUC20Q8N307 709 aaPredicted RBP13.66□□□□□ -0.22
YIF1A-209ENST00000494836 SPICQ8N5J4 248 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 LINC01356Q8N9X3 169 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 FBLIM1Q8WUP2 373 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 OR5P3Q8WZ94 311 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 RNF166Q96A37 237 aaPredicted RBP13.66□□□□□ -0.22
YIF1A-209ENST00000494836 HIST1H2AAQ96QV6 131 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 ZNF649Q9BS31 505 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 ISG20L2Q9H9L3 353 aaKnown RBP13.66□□□□□ -0.22
YIF1A-209ENST00000494836 PLEKHA1Q9HB21 404 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 YAE1D1Q9NRH1 226 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 C1orf123Q9NWV4 160 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 UBAP1Q9NZ09 502 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 RNF7Q9UBF6 113 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 V9GYS6 101 aa13.66□□□□□ -0.22
YIF1A-209ENST00000494836 SONP18583 2426 aaKnown RBP13.65□□□□□ -0.22
YIF1A-209ENST00000494836 NF1P21359 2839 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 LOC107986453A0A1B0GWG9 222 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 hCG_1807616A0A1W2PRN6 198 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 IGHV2-5P01817 119 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 LIMS3P0CW19 117 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 LIMS4P0CW20 117 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 MYL12AP19105 171 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 CDH15P55291 814 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 NANOS3P60323 173 aaKnown RBP13.65□□□□□ -0.22
YIF1A-209ENST00000494836 MRPL28Q13084 256 aaKnown RBP13.65□□□□□ -0.22
YIF1A-209ENST00000494836 ZNF154Q13106 437 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 TMEM155Q4W5P6 130 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 FAM166AQ6J272 317 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 IZUMO2Q6UXV1 221 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 KCTD8Q6ZWB6 473 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 WDR86Q86TI4 376 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 LRRC28Q86X40 367 aaPredicted RBP13.65□□□□□ -0.22
YIF1A-209ENST00000494836 KLHL36Q8N4N3 616 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 CCDC54Q8NEL0 328 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 OR1M1Q8NGA1 313 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 OR14K1Q8NGZ2 314 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 HPSE2Q8WWQ2 592 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 C1orf159Q96HA4 380 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 FRRS1LQ9P0K9 344 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 DIMT1Q9UNQ2 313 aaKnown RBP13.65□□□□□ -0.22
YIF1A-209ENST00000494836 NIPBLQ6KC79 2804 aaeCLIP13.65□□□□□ -0.22
YIF1A-209ENST00000494836 ZFHX3Q15911 3703 aa13.65□□□□□ -0.22
YIF1A-209ENST00000494836 ANK3Q12955 4377 aaKnown RBP13.64□□□□□ -0.23
YIF1A-209ENST00000494836 PPIAL4EA0A075B759 164 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 EFCAB10A6NFE3 127 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 TMEM210A6NLX4 147 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 A8MV72 311 aaPredicted RBP13.64□□□□□ -0.23
YIF1A-209ENST00000494836 B4DSR2 109 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 PPIAL4DF5H284 164 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 H3BSH0 61 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 XPNPEP2O43895 674 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 ZNF205O95201 554 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 TGFAP01135 160 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 PPIAL4FP0DN26 164 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 PIPP12273 146 aaPredicted RBP13.64□□□□□ -0.23
YIF1A-209ENST00000494836 ZNF12P17014 697 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 THBS2P35442 1172 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 HSPA13P48723 471 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 ETV1P50549 477 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 CCR9P51686 369 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 MED21Q13503 144 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 CEP78Q5JTW2 689 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 CLVS2Q5SYC1 327 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 TMEM244Q5VVB8 128 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 PLCXD3Q63HM9 321 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 LAIR2Q6ISS4 152 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 Q6ZSR3 168 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 ZNF826PQ6ZT77 177 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 BPIFB6Q8NFQ5 453 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 HAVCR2Q8TDQ0 301 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 TMEM80Q96HE8 168 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 RNF170Q96K19 258 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 CNOT2Q9NZN8 540 aaKnown RBP13.64□□□□□ -0.23
YIF1A-209ENST00000494836 PCDHB10Q9UN67 800 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 EXOSC1Q9Y3B2 195 aaKnown RBP13.64□□□□□ -0.23
YIF1A-209ENST00000494836 RRP15Q9Y3B9 282 aaKnown RBP13.64□□□□□ -0.23
YIF1A-209ENST00000494836 PPIAL4AQ9Y536 164 aa13.64□□□□□ -0.23
YIF1A-209ENST00000494836 FN1P02751 2386 aaKnown RBP13.64□□□□□ -0.23
YIF1A-209ENST00000494836 OR5B21A6NL26 309 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 FAM157AC9JC47 383 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 INAFM1C9JVW0 142 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 FSTL3O95633 263 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 NRASP01111 189 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 GPM6AP51674 278 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 GBX2P52951 348 aaPredicted RBP13.63□□□□□ -0.23
YIF1A-209ENST00000494836 CSNK2BP67870 215 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 ST3GAL4Q11206 333 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 ALKBH1Q13686 389 aaKnown RBP13.63□□□□□ -0.23
YIF1A-209ENST00000494836 CEACAM21Q3KPI0 293 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 FAM201AQ5SY85 155 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 TMEM42Q69YG0 159 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 TMPRSS11AQ6ZMR5 421 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 MOB3CQ70IA8 216 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 RDH10Q8IZV5 341 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 BOLLQ8N9W6 283 aaKnown RBP13.63□□□□□ -0.23
YIF1A-209ENST00000494836 GGHQ92820 318 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 FGF23Q9GZV9 251 aaPredicted RBP13.63□□□□□ -0.23
YIF1A-209ENST00000494836 TLNRD1Q9H1K6 362 aa13.63□□□□□ -0.23
YIF1A-209ENST00000494836 PLCXD1Q9NUJ7 323 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms