RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ZNF92Q03936 586 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 TTLL10Q6ZVT0 673 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ARHGEF39Q8N4T4 335 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 WFIKKN2Q8TEU8 576 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ZCCHC14Q8WYQ9 949 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF514Q96K75 400 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SNX22Q96L94 193 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ALKBH3Q96Q83 286 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 OR8B4Q96RC9 309 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FKBP11Q9NYL4 201 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 HSPB7Q9UBY9 170 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 HIF3AQ9Y2N7 669 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 WDR45Q9Y484 360 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 PUS1Q9Y606 427 aaKnown RBP eCLIP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 IGHV2-70DA0A0C4DH43 119 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 A0A1W2PPV9 198 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MEIS3P1A6NDR6 274 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF840PA6NDX5 716 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FCMRO60667 390 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 GYPBP06028 91 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CT45A8P0DMV1 189 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CT45A9P0DMV2 189 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MMP9P14780 707 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CEBPBP17676 345 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FUT3P21217 361 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 AK4P27144 223 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 GDI1P31150 447 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 PPP1CCP36873 323 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ACAA2P42765 397 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 POLR2HP52434 150 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 POLR2LP62875 67 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FOXK1P85037 733 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 BEX3Q00994 111 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MFGE8Q08431 387 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MAP2K5Q13163 448 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FZD2Q14332 565 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CT45A2Q5DJT8 189 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 WDR38Q5JTN6 314 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CLEC2AQ6UVW9 174 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 C16orf54Q6UWD8 224 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SSX7Q7RTT5 188 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 AMZ2Q86W34 360 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF679Q8IYX0 411 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MARCH1Q8TCQ1 289 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MRPL24Q96A35 216 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SLC35E1Q96K37 410 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 HIST1H2AAQ96QV6 131 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 WWTR1Q9GZV5 400 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 TCEAL2Q9H3H9 227 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CREBZFQ9NS37 354 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SLC45A2Q9UMX9 530 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 GPR34Q9UPC5 381 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SLC7A11Q9UPY5 501 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MRPS18BQ9Y676 258 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 LOC105371242A0A075B767 164 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 A0A1W2PR48 441 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 C17orf102A2RUQ5 167 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 COCHO43405 550 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 PQBP1O60828 265 aaKnown RBP4.24□□□□□ -1.73
PRKD3-210ENST00000494667 NDUFB8O95169 186 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 OR13C7P0DN81 318 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 AKR1A1P14550 325 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 HNF1AP20823 631 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 SRP14P37108 136 aaKnown RBP4.24□□□□□ -1.73
PRKD3-210ENST00000494667 CTRLP40313 264 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 WNT5AP41221 380 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 RAB7AP51149 207 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 SLC16A1P53985 500 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 BTG2P78543 158 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 MRPL2Q5T653 305 aaKnown RBP4.24□□□□□ -1.73
PRKD3-210ENST00000494667 CST9Q5W186 159 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 DEGS2Q6QHC5 323 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 SGPP2Q8IWX5 399 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 OR4D5Q8NGN0 318 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 MFSD8Q8NHS3 518 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 ERGIC1Q969X5 290 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 G6PC3Q9BUM1 346 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 CSTL1Q9H114 145 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 CAPN10Q9HC96 672 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 LYRM2Q9NU23 88 aaPredicted RBP4.24□□□□□ -1.73
PRKD3-210ENST00000494667 B4GALT6Q9UBX8 382 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 IER3IP1Q9Y5U9 82 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 WSB1Q9Y6I7 421 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 A0A087WV48 116 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 A0A1W2PS29 197 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 XKRY2A2RUG3 117 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 OR6C6A6NF89 314 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 CRYM-AS1A6NIL9 109 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 XKRYO14609 159 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 GRM6O15303 877 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 CCL25O15444 150 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 AHSA1O95433 338 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 CTSDP07339 412 aaPredicted RBP4.24□□□□□ -1.73
PRKD3-210ENST00000494667 NBEAP1P0C6P0 100 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 PGA3P0DJD8 388 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 AKR1C4P17516 323 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 PSMB5P28074 263 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 LSSP48449 732 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 PAFAH1B2P68402 229 aa4.24□□□□□ -1.73
PRKD3-210ENST00000494667 IL24Q13007 206 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms