RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MAGEB4O15481 346 aaPredicted RBP7.94□□□□□ -1.14
MSH5-218ENST00000494646 PRODHO43272 600 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 AKR7A2O43488 359 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 LIPFP07098 398 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 RNASE1P07998 156 aaKnown RBP7.94□□□□□ -1.14
MSH5-218ENST00000494646 MMP9P14780 707 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 ALOX5APP20292 161 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 CFL1P23528 166 aaKnown RBP7.94□□□□□ -1.14
MSH5-218ENST00000494646 PRB3Q04118 309 aaPredicted RBP7.94□□□□□ -1.14
MSH5-218ENST00000494646 IKZF1Q13422 519 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 PTGES3Q15185 160 aaKnown RBP7.94□□□□□ -1.14
MSH5-218ENST00000494646 MICBQ29980 383 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 WDR38Q5JTN6 314 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 SLC35D3Q5M8T2 416 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 METTL11BQ5VVY1 283 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 C16orf87Q6PH81 154 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 C9orf139Q6ZV77 190 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 RHOUQ7L0Q8 258 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 BCDIN3DQ7Z5W3 292 aaKnown RBP7.94□□□□□ -1.14
MSH5-218ENST00000494646 GALNT4Q8N4A0 578 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 PNLDC1Q8NA58 520 aaKnown RBP7.94□□□□□ -1.14
MSH5-218ENST00000494646 PAPD5Q8NDF8 572 aaKnown RBP7.94□□□□□ -1.14
MSH5-218ENST00000494646 OR8B12Q8NGG6 310 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 WDFY2Q96P53 400 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 ZNF747Q9BV97 191 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 TEX12Q9BXU0 123 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 CADM1Q9BY67 442 aaKnown RBP7.94□□□□□ -1.14
MSH5-218ENST00000494646 WDR13Q9H1Z4 485 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 CNTD2Q9H8S5 307 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 FAM53CQ9NYF3 392 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 KIF17Q9P2E2 1029 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 LRP12Q9Y561 859 aa7.94□□□□□ -1.14
MSH5-218ENST00000494646 TMEM269A0A1B0GVZ9 245 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 A6NJY4 79 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.93□□□□□ -1.14
MSH5-218ENST00000494646 SPRY1O43609 319 aaPredicted RBP7.93□□□□□ -1.14
MSH5-218ENST00000494646 NDUFB3O43676 98 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 MITFO75030 526 aaPredicted RBP7.93□□□□□ -1.14
MSH5-218ENST00000494646 MUC1P15941 1255 aaPredicted RBP7.93□□□□□ -1.14
MSH5-218ENST00000494646 AMY2BP19961 511 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 SLC2A5P22732 501 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 DLX1P56177 255 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 IL5RAQ01344 420 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 CEP78Q5JTW2 689 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 Q6YL49 198 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 MOB3CQ70IA8 216 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 FAM216BQ8N7L0 139 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 TCEANCQ8N8B7 351 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 SCCPDHQ8NBX0 429 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 SGMS2Q8NHU3 365 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 OR5P3Q8WZ94 311 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 UTP4Q969X6 686 aaKnown RBP7.93□□□□□ -1.14
MSH5-218ENST00000494646 TMIGD2Q96BF3 282 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 ITPKCQ96DU7 683 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 HIST1H2AAQ96QV6 131 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 PKP2Q99959 881 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 RTL8AQ9BWD3 113 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 FGF23Q9GZV9 251 aaPredicted RBP7.93□□□□□ -1.14
MSH5-218ENST00000494646 SIRPDQ9H106 197 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 UNKLQ9H9P5 680 aaKnown RBP7.93□□□□□ -1.14
MSH5-218ENST00000494646 SLC25A19Q9HC21 320 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 PAPOLBQ9NRJ5 636 aaKnown RBP7.93□□□□□ -1.14
MSH5-218ENST00000494646 HAO2Q9NYQ3 351 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 KAAG1Q9UBP8 84 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 RPUSD1Q9UJJ7 312 aaKnown RBP7.93□□□□□ -1.14
MSH5-218ENST00000494646 COPS3Q9UNS2 423 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 MPC1Q9Y5U8 109 aa7.93□□□□□ -1.14
MSH5-218ENST00000494646 A0A1W2PRD5 423 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 A0A1W2PRF3 423 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 A0A1W2PRM7 423 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 FAM181BA6NEQ2 426 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 CCDC182A6NF36 153 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 PRR32B1ATL7 298 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 SRRM5B3KS81 715 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 ZNF732B4DXR9 585 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 M0R129 80 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 PRKYO43930 277 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 RHBDL1O75783 438 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 ECDO95905 644 aaPredicted RBP7.92□□□□□ -1.14
MSH5-218ENST00000494646 CST4P01036 141 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 SELLP14151 372 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 HOXB6P17509 224 aaKnown RBP7.92□□□□□ -1.14
MSH5-218ENST00000494646 MDKP21741 143 aaPredicted RBP7.92□□□□□ -1.14
MSH5-218ENST00000494646 EPHA2P29317 976 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 MAP2K3P46734 347 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 GABRA2P47869 451 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 GPM6AP51674 278 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 PDCD1Q15116 288 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 C11orf91Q3C1V1 193 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 KCTD18Q6PI47 426 aaPredicted RBP7.92□□□□□ -1.14
MSH5-218ENST00000494646 FIP1L1Q6UN15 594 aaKnown RBP7.92□□□□□ -1.14
MSH5-218ENST00000494646 SLC36A1Q7Z2H8 476 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 VMO1Q7Z5L0 202 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 AMIGO2Q86SJ2 522 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 COMMD2Q86X83 199 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 ZDHHC23Q8IYP9 409 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 LILRB2Q8N423 598 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 FTMTQ8N4E7 242 aa7.92□□□□□ -1.14
MSH5-218ENST00000494646 OR5K1Q8NHB7 308 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms