RNA–Protein interactions for RNA: ENST00000494607.5

PQLC1-208, Transcript of PQ loop repeat containing 1, human

TSL 3

Gene PQLC1, Length 666 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PQLC1-208	ENST00000494607	DCAF16	Q9NXF7	216 aa		13.55	□□□□□ -0.24
PQLC1-208	ENST00000494607	CNOT2	Q9NZN8	540 aa	Known RBP	13.55	□□□□□ -0.24
PQLC1-208	ENST00000494607	RNF7	Q9UBF6	113 aa		13.55	□□□□□ -0.24
PQLC1-208	ENST00000494607	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.55	□□□□□ -0.24
PQLC1-208	ENST00000494607		V9GYS6	101 aa		13.55	□□□□□ -0.24
PQLC1-208	ENST00000494607		B4DSR2	109 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	WNT9B	O14905	357 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	GRP	P07492	148 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	LIMS3	P0CW19	117 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	LIMS4	P0CW20	117 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	ZNF16	P17020	682 aa	Predicted RBP	13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	IL2RG	P31785	369 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	GBX2	P52951	348 aa	Predicted RBP	13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	CSNK2B	P67870	215 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	ZMYND11	Q15326	602 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	MPPED2	Q15777	294 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	ODF4	Q2M2E3	257 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	CLVS2	Q5SYC1	327 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	IZUMO2	Q6UXV1	221 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607		Q71RC1	249 aa	Predicted RBP	13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	LRRC28	Q86X40	367 aa	Predicted RBP	13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	KLHL36	Q8N4N3	616 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	LINC01356	Q8N9X3	169 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	OR1M1	Q8NGA1	313 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	OR14K1	Q8NGZ2	314 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	MSI2	Q96DH6	328 aa	Known RBP	13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	C1orf159	Q96HA4	380 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	TMEM80	Q96HE8	168 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	ZNF649	Q9BS31	505 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	ZNF665	Q9H7R5	613 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	TRIM36	Q9NQ86	728 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	C1orf123	Q9NWV4	160 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	PCDHB10	Q9UN67	800 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	CAB39	Q9Y376	341 aa	Predicted RBP	13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	ZAN	Q9Y493	2812 aa		13.54	□□□□□ -0.24
PQLC1-208	ENST00000494607	DYSF	O75923	2080 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	PPIAL4E	A0A075B759	164 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	LOC107986453	A0A1B0GWG9	222 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	hCG_1807616	A0A1W2PRN6	198 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	OR5B21	A6NL26	309 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607		A8MV72	311 aa	Predicted RBP	13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	PPIAL4D	F5H284	164 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	CYB5R3	P00387	301 aa	Predicted RBP	13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	IGHV2-5	P01817	119 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	ISG15	P05161	165 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	PPIAL4F	P0DN26	164 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	CPT2	P23786	658 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	VHL	P40337	213 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	PMEL	P40967	661 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	KIR3DL2	P43630	455 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	LMO4	P61968	165 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	KCNJ8	Q15842	424 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	CEACAM21	Q3KPI0	293 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	PLCXD3	Q63HM9	321 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	FAM166A	Q6J272	317 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	KCTD8	Q6ZWB6	473 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	C10orf35	Q96D05	121 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	RNF170	Q96K19	258 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	TLNRD1	Q9H1K6	362 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	ISG20L2	Q9H9L3	353 aa	Known RBP	13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	YAE1D1	Q9NRH1	226 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	UBAP1	Q9NZ09	502 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	FRRS1L	Q9P0K9	344 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	PPIAL4A	Q9Y536	164 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	TLN2	Q9Y4G6	2542 aa		13.53	□□□□□ -0.24
PQLC1-208	ENST00000494607	CSPG4	Q6UVK1	2322 aa		13.52	□□□□□ -0.24
PQLC1-208	ENST00000494607	NSD1	Q96L73	2696 aa	Predicted RBP	13.52	□□□□□ -0.24
PQLC1-208	ENST00000494607	NRAS	P01111	189 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	TGFA	P01135	160 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	CCDC159	P0C7I6	412 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	PCMT1	P22061	227 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	TGM4	P49221	684 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	NANOS3	P60323	173 aa	Known RBP	13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	GNG3	P63215	75 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	ST3GAL4	Q11206	333 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	ZNF154	Q13106	437 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	ALKBH1	Q13686	389 aa	Known RBP	13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	CCDC58	Q4VC31	144 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	TMEM42	Q69YG0	159 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	WDR86	Q86TI4	376 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	ZNF676	Q8N7Q3	588 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	BPIFB6	Q8NFQ5	453 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	OR5A2	Q8NGI9	324 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	OR51F2	Q8NH61	342 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	HPSE2	Q8WWQ2	592 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	GGH	Q92820	318 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	RNF166	Q96A37	237 aa	Predicted RBP	13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	TECTB	Q96PL2	329 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	ANKRD60	Q9BZ19	345 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	PSORS1C1	Q9UIG5	152 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	KCNS2	Q9ULS6	477 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	HIVEP2	P31629	2446 aa		13.52	□□□□□ -0.25
PQLC1-208	ENST00000494607	ANKRD61	A6NGH8	418 aa		13.51	□□□□□ -0.25
PQLC1-208	ENST00000494607	TMEM212	A6NML5	194 aa		13.51	□□□□□ -0.25
PQLC1-208	ENST00000494607	XPNPEP2	O43895	674 aa		13.51	□□□□□ -0.25
PQLC1-208	ENST00000494607	GATB	O75879	557 aa	Known RBP	13.51	□□□□□ -0.25
PQLC1-208	ENST00000494607	SERPINA3	P01011	423 aa		13.51	□□□□□ -0.25
PQLC1-208	ENST00000494607	MYF6	P23409	242 aa		13.51	□□□□□ -0.25
PQLC1-208	ENST00000494607	ETV1	P50549	477 aa		13.51	□□□□□ -0.25
PQLC1-208	ENST00000494607	GPM6A	P51674	278 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms