RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ENDOGQ14249 297 aaKnown RBP17.18■□□□□ 0.34
COL27A1-207ENST00000494090 HAGHQ16775 308 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 GSG1Q2KHT4 349 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 MOB1BQ7L9L4 216 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 FBXL14Q8N1E6 418 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 TMEM231Q9H6L2 316 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 TMEM30CPA0ZSE6 113 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 NDUFB3O43676 98 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 CD37P11049 281 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 MPLP40238 635 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 FUT7Q11130 342 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 ZNF766Q5HY98 468 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 SLC38A6Q8IZM9 456 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 M1APQ8TC57 530 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 OCIAD1Q9NX40 245 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 FBP1P09467 338 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 BMI1P35226 326 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 P2RX3P56373 397 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 FOXC1Q12948 553 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 CLLU1Q5K131 121 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 C8orf82Q6P1X6 216 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-207ENST00000494090 DRAM2Q6UX65 266 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 SLC36A1Q7Z2H8 476 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 FAM58AQ8N1B3 248 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 OR6C68A6NDL8 312 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 CTSVO60911 334 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 SCAND1P57086 179 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 BPIFCQ8NFQ6 507 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 OR10G3Q8NGC4 313 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 OR8U1Q8NH10 309 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 PAPPA2Q9BXP8 1791 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 ZNF117Q03924 483 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 C17orf107Q6ZR85 190 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 LHX4Q969G2 390 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 SAT2Q96F10 170 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-207ENST00000494090 OR2A5Q96R48 311 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 PRRX2Q99811 253 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 P4HTMQ9NXG6 502 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 CTRB1P17538 263 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 CTRB2Q6GPI1 263 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 C11orf87Q6NUJ2 197 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 C17orf78Q8N4C9 275 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 ZFP62Q8NB50 900 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-207ENST00000494090 SERGEFQ9UGK8 458 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 GNG3P63215 75 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 WDR38Q5JTN6 314 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 ZDHHC22Q8N966 263 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 OR5B3Q8NH48 314 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 ZNF764Q96H86 408 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-207ENST00000494090 CHEK1O14757 476 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 GPR37O15354 613 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 KLK10O43240 276 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 POU2F2P09086 479 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 OR2W3Q7Z3T1 314 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 ZBTB44Q8NCP5 570 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 OR4C3Q8NH37 302 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 SLC39A7Q92504 469 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 ZDHHC16Q969W1 377 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 PINX1Q96BK5 328 aaKnown RBP17.17■□□□□ 0.34
COL27A1-207ENST00000494090 WBP1LQ9NX94 342 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 PSENENQ9NZ42 101 aa17.17■□□□□ 0.34
COL27A1-207ENST00000494090 DLEC1Q9Y238 1755 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 ARID1BQ8NFD5 2236 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-207ENST00000494090 OR5H15A6NDH6 313 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 OR5H1A6NKK0 313 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 TRIM77I1YAP6 450 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 CYTIPO60759 359 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 WNT1P04628 370 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 TIAL1Q01085 375 aaKnown RBP eCLIP17.16■□□□□ 0.342e-7■■■■□ 24.3
COL27A1-207ENST00000494090 VMA21Q3ZAQ7 101 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 OR2B11Q5JQS5 317 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 TMEM230Q96A57 120 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 MYOZ1Q9NP98 299 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-207ENST00000494090 SIRT3Q9NTG7 399 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-207ENST00000494090 CD160O95971 181 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 FUT3P21217 361 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 RFC3P40938 356 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 TMEM104Q8NE00 496 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 ZG16BQ96DA0 208 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 ALKBH3Q96Q83 286 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-207ENST00000494090 FAHP16930 419 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 CDAP32320 146 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 HTRA4P83105 476 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-207ENST00000494090 SSPNQ14714 243 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 LCN15Q6UWW0 184 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 GPBAR1Q8TDU6 330 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 COX14Q96I36 57 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 UQCC2Q9BRT2 126 aa17.16■□□□□ 0.34
COL27A1-207ENST00000494090 TINAGL1Q9GZM7 467 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-207ENST00000494090 ZFPL1O95159 310 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 ZIC1Q15915 447 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 ZNF547Q8IVP9 402 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 OR5AP2Q8NGF4 316 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 C4orf45Q96LM5 186 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 TMEM211Q6ICI0 200 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 TRAT1Q6PIZ9 186 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 PDGFBP01127 241 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-207ENST00000494090 HOXC8P31273 242 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 OR4S1Q8NGB4 309 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 AKR7LQ8NHP1 331 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms