RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PLGP00747 810 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-234ENST00000493923 OR12D1P0DN82 309 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 FCGR2AP12318 317 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 UQCRC2P22695 453 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 CRABP1P29762 137 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 RPL3P39023 403 aaKnown RBP7.15□□□□□ -1.26
HDAC6-234ENST00000493923 PCP4P48539 62 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 PTH2RP49190 550 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 CCR4P51679 360 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 FOXG1P55316 489 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-234ENST00000493923 ZNF141Q15928 474 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 SLC25A53Q5H9E4 307 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 HEPHL1Q6MZM0 1159 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 TNFAIP8L2Q6P589 184 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-234ENST00000493923 TMEM88Q6PEY1 159 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 CLEC9AQ6UXN8 241 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 RBMS3Q6XE24 437 aaKnown RBP7.15□□□□□ -1.26
HDAC6-234ENST00000493923 ZNF621Q6ZSS3 439 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 FCRLAQ7L513 359 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 DPPA2Q7Z7J5 298 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 BIVMQ86UB2 503 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 COMTD1Q86VU5 262 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 KLBQ86Z14 1044 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 LNX2Q8N448 690 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 KCNRGQ8N5I3 272 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 TRMT10AQ8TBZ6 339 aaKnown RBP7.15□□□□□ -1.26
HDAC6-234ENST00000493923 STK35Q8TDR2 534 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 C2CD4CQ8TF44 421 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 ACOT11Q8WXI4 607 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-234ENST00000493923 HSD17B8Q92506 261 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 TMEM203Q969S6 136 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 GTPBP3Q969Y2 492 aaKnown RBP7.15□□□□□ -1.26
HDAC6-234ENST00000493923 C14orf144Q96I85 54 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 SLC35G5Q96KT7 338 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 IL4I1Q96RQ9 567 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 S100A13Q99584 98 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 CCL19Q99731 98 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 GGACTQ9BVM4 153 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 FXYD6Q9H0Q3 95 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 WNT5BQ9H1J7 359 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 OR51I1Q9H343 314 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 TMEM38AQ9H6F2 299 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 TPT1P8Q9HAU6 139 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 MMP26Q9NRE1 261 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 SLC6A13Q9NSD5 602 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 ACER3Q9NUN7 267 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 CALML5Q9NZT1 146 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 PCDHB10Q9UN67 800 aa7.15□□□□□ -1.26
HDAC6-234ENST00000493923 TRBV23-1A0A0A0MS06 115 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 DPRXA6NFQ7 191 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 COLCA2A8K830 154 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 H3BN98 237 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 GABARAPH6UMI1 98 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF264O43296 627 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 LANCL1O43813 399 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 CUBNO60494 3623 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 EIF4E2O60573 245 aaKnown RBP7.14□□□□□ -1.27
HDAC6-234ENST00000493923 NDUFS7O75251 213 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 MBP02144 154 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 HPXP02790 462 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 SERPINA5P05154 406 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 EIF4EP06730 217 aaKnown RBP7.14□□□□□ -1.27
HDAC6-234ENST00000493923 SOD3P08294 240 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 ADRA2AP08913 450 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 SPARCP09486 303 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 SLC25A4P12235 298 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 MUC1P15941 1255 aaPredicted RBP7.14□□□□□ -1.27
HDAC6-234ENST00000493923 PTNP21246 168 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 IFNGR2P38484 337 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 CRATP43155 626 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 GLP1RP43220 463 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 KRTAP1-1Q07627 177 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 ARHGAP11BQ3KRB8 267 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 BEX5Q5H9J7 111 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 TMEM255AQ5JRV8 349 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 SFRP5Q5T4F7 317 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 TMEM244Q5VVB8 128 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF770Q6IQ21 691 aaPredicted RBP7.14□□□□□ -1.27
HDAC6-234ENST00000493923 RAB12Q6IQ22 244 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 EIF5AL1Q6IS14 154 aaKnown RBP7.14□□□□□ -1.27
HDAC6-234ENST00000493923 SFXN4Q6P4A7 337 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF813Q6ZN06 617 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 FRRS1Q6ZNA5 592 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 PRIMA1Q86XR5 153 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 CBLN2Q8IUK8 224 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 LRRC75A-AS1Q8N1F1 130 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 TCEANCQ8N8B7 351 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 MAPK1IP1LQ8NDC0 245 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 OR9Q2Q8NGE9 314 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 OR5W2Q8NH69 310 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 HAVCR2Q8TDQ0 301 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 THEM6Q8WUY1 208 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 CCDC107Q8WV48 283 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 C3orf49Q96BT1 292 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 LRR1Q96L50 414 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 NOL4LQ96MY1 436 aaPredicted RBP7.14□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF582Q96NG8 517 aaPredicted RBP7.14□□□□□ -1.27
HDAC6-234ENST00000493923 OR11A1Q9GZK7 315 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF350Q9GZX5 532 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 LAT2Q9GZY6 243 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms