RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 OR52H1Q8NGJ2 320 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 OR5L1Q8NGL2 311 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 OR5AK2Q8NH90 309 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 APOBEC3DQ96AK3 386 aaPredicted RBP10.39□□□□□ -0.75
UPF3A-210ENST00000493727 SMIM19Q96E16 107 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 NUFIP1Q9UHK0 495 aaKnown RBP10.39□□□□□ -0.75
UPF3A-210ENST00000493727 SLC22A13Q9Y226 551 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 SPEF1Q9Y4P9 236 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 ATP23Q9Y6H3 246 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 PMF1-BGLAPU3KQ54 211 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 A0A096LNT2 108 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 A0A1B0GVI7 797 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 H3BSH0 61 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 P2RY10O00398 339 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 CCRL2O00421 344 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 OGG1O15527 345 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 PHF1O43189 567 aaPredicted RBP10.38□□□□□ -0.75
UPF3A-210ENST00000493727 PAX4O43316 350 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 APOBEC3AP31941 199 aaPredicted RBP10.38□□□□□ -0.75
UPF3A-210ENST00000493727 WNT5AP41221 380 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 KIR3DL2P43630 455 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 CCR9P51686 369 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 LOXL1Q08397 574 aaPredicted RBP10.38□□□□□ -0.75
UPF3A-210ENST00000493727 RSPO1Q2MKA7 263 aaPredicted RBP10.38□□□□□ -0.75
UPF3A-210ENST00000493727 CHRFAM7AQ494W8 412 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 RFPL4BQ6ZWI9 263 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 MRPL21Q7Z2W9 205 aaKnown RBP10.38□□□□□ -0.75
UPF3A-210ENST00000493727 C1orf174Q8IYL3 243 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 PDCD1LG2Q9BQ51 273 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 TMED9Q9BVK6 235 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 C1QTNF5Q9BXJ0 243 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 G6PC2Q9NQR9 355 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 TBCCD1Q9NVR7 557 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 PTTG3PQ9NZH4 202 aa10.38□□□□□ -0.75
UPF3A-210ENST00000493727 SIRT4Q9Y6E7 314 aaPredicted RBP10.38□□□□□ -0.75
UPF3A-210ENST00000493727 IGHV4-30-2A0A087WSY4 118 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 LOC107986453A0A1B0GWG9 222 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 OR4C45A6NMZ5 311 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 ATP6V1G2-DDX39BF2Z307 99 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 XRCC2O43543 280 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 GPRIN2O60269 458 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 ZFPL1O95159 310 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 TFAP2AP05549 437 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 FAM157CP0CG43 387 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 ZNF35P13682 527 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 CD36P16671 472 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 CPEP16870 476 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 CALCRP30988 508 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 RAD52P43351 418 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 ALDH3B2P48448 385 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 EFNA4P52798 201 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 UCP2P55851 309 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 PPP1CBP62140 327 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 RPS23P62266 143 aaKnown RBP10.37□□□□□ -0.75
UPF3A-210ENST00000493727 SPOCK1Q08629 439 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 SNTB2Q13425 540 aaKnown RBP10.37□□□□□ -0.75
UPF3A-210ENST00000493727 GPR50Q13585 617 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 TPBGQ13641 420 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 SNAI3Q3KNW1 292 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 GLYATL3Q5SZD4 288 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 SPATA46Q5T0L3 261 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 TMEM244Q5VVB8 128 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 DMKNQ6E0U4 476 aaPredicted RBP10.37□□□□□ -0.75
UPF3A-210ENST00000493727 ELMOD2Q8IZ81 293 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 ZNF101Q8IZC7 436 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 OR1J1Q8NGS3 322 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 OR51E1Q8TCB6 317 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 TSEN15Q8WW01 171 aaKnown RBP10.37□□□□□ -0.75
UPF3A-210ENST00000493727 GHSRQ92847 366 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 TMEM203Q969S6 136 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 PPP1R14AQ96A00 147 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 REEP6Q96HR9 211 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 FAM71F1Q96KD3 344 aaPredicted RBP10.37□□□□□ -0.75
UPF3A-210ENST00000493727 BCL2L14Q9BZR8 327 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 RGCCQ9H4X1 137 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 TMEM160Q9NX00 188 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 CDC42EP3Q9UKI2 254 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 RNF114Q9Y508 228 aa10.37□□□□□ -0.75
UPF3A-210ENST00000493727 A0A0U1RQV5 110 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 SYT7O43581 403 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 PLPP2O43688 288 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 PSPNO60542 156 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 NOL3O60936 208 aaKnown RBP10.36□□□□□ -0.75
UPF3A-210ENST00000493727 NGFP01138 241 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 TTRP02766 147 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 NAT2P11245 290 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 ACHEP22303 614 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 TUBG1P23258 451 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 CFL1P23528 166 aaKnown RBP10.36□□□□□ -0.75
UPF3A-210ENST00000493727 PSMA1P25786 263 aaKnown RBP10.36□□□□□ -0.75
UPF3A-210ENST00000493727 GABRA5P31644 462 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 LIPAP38571 399 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 RPS25P62851 125 aaKnown RBP10.36□□□□□ -0.75
UPF3A-210ENST00000493727 TRAM1Q15629 374 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 SSX1Q16384 188 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 TMEM249Q2WGJ8 235 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 KRTAP24-1Q3LI83 254 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 YIF1BQ5BJH7 314 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 COLCA1Q6ZS62 124 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 DOK3Q7L591 496 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms