RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 GMDSO60547 372 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 CCDC159P0C7I6 412 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 ATP6V1B1P15313 513 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 GIFP27352 417 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 CD200P41217 278 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 NR4A2P43354 598 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 GBX2P52951 348 aaPredicted RBP9.79□□□□□ -0.84
CTSA-209ENST00000493522 NANOS3P60323 173 aaKnown RBP9.79□□□□□ -0.84
CTSA-209ENST00000493522 CSNK2BP67870 215 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 MVKQ03426 396 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 MZT1Q08AG7 82 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 RIPPLY1Q0D2K3 151 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 MRPL28Q13084 256 aaKnown RBP9.79□□□□□ -0.84
CTSA-209ENST00000493522 HNRNPA0Q13151 305 aaKnown RBP9.79□□□□□ -0.84
CTSA-209ENST00000493522 ALKBH1Q13686 389 aaKnown RBP9.79□□□□□ -0.84
CTSA-209ENST00000493522 FDX2Q6P4F2 183 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 MOGAT3Q86VF5 341 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 KLBQ86Z14 1044 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 ZDHHC23Q8IYP9 409 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 ZNF676Q8N7Q3 588 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 PIGCQ92535 297 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 CCL17Q92583 94 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 MYDGFQ969H8 173 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 TIMD4Q96H15 378 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 NARFLQ9H6Q4 476 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 ABCB9Q9NP78 766 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 UFSP2Q9NUQ7 469 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 C14orf119Q9NWQ9 140 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 TMEM160Q9NX00 188 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 CLEC2DQ9UHP7 191 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 ENPP5Q9UJA9 477 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 PPP1R3CQ9UQK1 317 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 TPRKBQ9Y3C4 175 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 MPC1Q9Y5U8 109 aa9.79□□□□□ -0.84
CTSA-209ENST00000493522 ISPDA4D126 451 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 VWC2LB2RUY7 222 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 PTGES3LE9PB15 166 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 E9PI62 339 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 CST4P01036 141 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 CDK1P06493 297 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 CCL1P22362 96 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 C21orf33P30042 268 aaPredicted RBP9.78□□□□□ -0.84
CTSA-209ENST00000493522 SLC3A1Q07837 685 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 LOXL1Q08397 574 aaPredicted RBP9.78□□□□□ -0.84
CTSA-209ENST00000493522 MAB21L1Q13394 359 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 RIN1Q13671 783 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 AVPI1Q5T686 147 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 ZBTB37Q5TC79 503 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 TMEM244Q5VVB8 128 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 PLCXD3Q63HM9 321 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 CELF2-AS1Q8N7Q2 184 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 SPERTQ8NA61 448 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 PLPP7Q8NBV4 271 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 OR11L1Q8NGX0 322 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 OR14K1Q8NGZ2 314 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 OR52N1Q8NH53 320 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 ZNF420Q8TAQ5 688 aaPredicted RBP9.78□□□□□ -0.84
CTSA-209ENST00000493522 HAVCR2Q8TDQ0 301 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 RNF166Q96A37 237 aaPredicted RBP9.78□□□□□ -0.84
CTSA-209ENST00000493522 MICU1Q9BPX6 476 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 RTL8AQ9BWD3 113 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 COMMD4Q9H0A8 199 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 SHARPINQ9H0F6 387 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 PPP1R3EQ9H7J1 279 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 GCM1Q9NP62 436 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 TRIM36Q9NQ86 728 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 TMEM106BQ9NUM4 274 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 FKBP14Q9NWM8 211 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 DCAF16Q9NXF7 216 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 FRRS1LQ9P0K9 344 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 V9GYS6 101 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.78□□□□□ -0.842e-7■■■□□ 16.7
CTSA-209ENST00000493522 DOCK11Q5JSL3 2073 aa9.78□□□□□ -0.84
CTSA-209ENST00000493522 A0A096LNT2 108 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 IGHV4-61A0A0C4DH41 118 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 hCG_1807616A0A1W2PRN6 198 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 A6NIN4 97 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 LRRC30A6NM36 301 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 OR4C45A6NMZ5 311 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 LMX1BO60663 402 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 GRPP07492 148 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 IRF2P14316 349 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 ZNF12P17014 697 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 USF1P22415 310 aaPredicted RBP9.77□□□□□ -0.85
CTSA-209ENST00000493522 RBMXP38159 391 aaKnown RBP9.77□□□□□ -0.85
CTSA-209ENST00000493522 GATA4P43694 442 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 TGM4P49221 684 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 CCR9P51686 369 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 GTF2A1P52655 376 aaPredicted RBP9.77□□□□□ -0.85
CTSA-209ENST00000493522 CEP78Q5JTW2 689 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 KCTD8Q6ZWB6 473 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 MOB3CQ70IA8 216 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 PEG10Q86TG7 708 aaKnown RBP9.77□□□□□ -0.85
CTSA-209ENST00000493522 EGFL6Q8IUX8 553 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 RDH10Q8IZV5 341 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 CCDC54Q8NEL0 328 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 TSEN15Q8WW01 171 aaKnown RBP9.77□□□□□ -0.85
CTSA-209ENST00000493522 HPSE2Q8WWQ2 592 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 GATAD2BQ8WXI9 593 aa9.77□□□□□ -0.85
CTSA-209ENST00000493522 SGCDQ92629 289 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms