RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 H3BSH0 61 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 SYT7O43581 403 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 ZNF205O95201 554 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 TGFAP01135 160 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 IGHV2-5P01817 119 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 UBCP0CG48 685 aaKnown RBP10.75□□□□□ -0.69
CLIP2-209ENST00000493166 MYL12AP19105 171 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 DCKP27707 260 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 MDH2P40926 338 aaKnown RBP10.75□□□□□ -0.69
CLIP2-209ENST00000493166 KIR3DL2P43630 455 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 RIPPLY3P57055 190 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 LMO4P61968 165 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 TMEM155Q4W5P6 130 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 CEP78Q5JTW2 689 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 FAM166AQ6J272 317 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 FDX2Q6P4F2 183 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 KCTD8Q6ZWB6 473 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 WDR86Q86TI4 376 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 SYS1Q8N2H4 156 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 MUC20Q8N307 709 aaPredicted RBP10.75□□□□□ -0.69
CLIP2-209ENST00000493166 KLHL36Q8N4N3 616 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 SPICQ8N5J4 248 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 OR1M1Q8NGA1 313 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 OR14K1Q8NGZ2 314 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 OR5P3Q8WZ94 311 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 JAM3Q9BX67 310 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 ISG20L2Q9H9L3 353 aaKnown RBP10.75□□□□□ -0.69
CLIP2-209ENST00000493166 PLEKHA1Q9HB21 404 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 C1orf123Q9NWV4 160 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 RNF7Q9UBF6 113 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 PCDHB10Q9UN67 800 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 V9GYS6 101 aa10.75□□□□□ -0.69
CLIP2-209ENST00000493166 ANK3Q12955 4377 aaKnown RBP10.75□□□□□ -0.69
CLIP2-209ENST00000493166 ARHGAP32A7KAX9 2087 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 PPIAL4EA0A075B759 164 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 LOC107986453A0A1B0GWG9 222 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 TMEM210A6NLX4 147 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 DHRS7CA6NNS2 312 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 B4DSR2 109 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 FAM157AC9JC47 383 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 INAFM1C9JVW0 142 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 PPIAL4DF5H284 164 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 NRASP01111 189 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 PPIAL4FP0DN26 164 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 ZNF12P17014 697 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 CCL1P22362 96 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 THBS2P35442 1172 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 NANOS3P60323 173 aaKnown RBP10.74□□□□□ -0.69
CLIP2-209ENST00000493166 MRPL28Q13084 256 aaKnown RBP10.74□□□□□ -0.69
CLIP2-209ENST00000493166 ZNF154Q13106 437 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 MED21Q13503 144 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 CEACAM21Q3KPI0 293 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 FAM201AQ5SY85 155 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 TMEM244Q5VVB8 128 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 PLCXD3Q63HM9 321 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 IZUMO2Q6UXV1 221 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 Q6ZSR3 168 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 ZNF826PQ6ZT77 177 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 MOB3CQ70IA8 216 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 KRT74Q7RTS7 529 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 LRRC28Q86X40 367 aaPredicted RBP10.74□□□□□ -0.69
CLIP2-209ENST00000493166 EGFL6Q8IUX8 553 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 BOLLQ8N9W6 283 aaKnown RBP10.74□□□□□ -0.69
CLIP2-209ENST00000493166 CCDC54Q8NEL0 328 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 FBLIM1Q8WUP2 373 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 HPSE2Q8WWQ2 592 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 RNF166Q96A37 237 aaPredicted RBP10.74□□□□□ -0.69
CLIP2-209ENST00000493166 C1orf159Q96HA4 380 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 TMEM80Q96HE8 168 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 RNF170Q96K19 258 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 ZNF649Q9BS31 505 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 LPAR2Q9HBW0 351 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 FRRS1LQ9P0K9 344 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 KCNS2Q9ULS6 477 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 DIMT1Q9UNQ2 313 aaKnown RBP10.74□□□□□ -0.69
CLIP2-209ENST00000493166 EXOSC1Q9Y3B2 195 aaKnown RBP10.74□□□□□ -0.69
CLIP2-209ENST00000493166 PPIAL4AQ9Y536 164 aa10.74□□□□□ -0.69
CLIP2-209ENST00000493166 SONP18583 2426 aaKnown RBP10.73□□□□□ -0.69
CLIP2-209ENST00000493166 EFCAB10A6NFE3 127 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 A6NIN4 97 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 LMX1BO60663 402 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 ISG15P05161 165 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 LIMS3P0CW19 117 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 LIMS4P0CW20 117 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 PIPP12273 146 aaPredicted RBP10.73□□□□□ -0.69
CLIP2-209ENST00000493166 HSPA13P48723 471 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 ETV1P50549 477 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 GPM6AP51674 278 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 CCR9P51686 369 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 GBX2P52951 348 aaPredicted RBP10.73□□□□□ -0.69
CLIP2-209ENST00000493166 GNG3P63215 75 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 CSNK2BP67870 215 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 ALKBH1Q13686 389 aaKnown RBP10.73□□□□□ -0.69
CLIP2-209ENST00000493166 CLVS2Q5SYC1 327 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 LAIR2Q6ISS4 152 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 TMPRSS11AQ6ZMR5 421 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 RDH10Q8IZV5 341 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 ZNF676Q8N7Q3 588 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 BPIFB6Q8NFQ5 453 aa10.73□□□□□ -0.69
CLIP2-209ENST00000493166 OR51F2Q8NH61 342 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms