RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 DNAJB11Q9UBS4 358 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 LAMP5Q9UJQ1 280 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 RHBDD3Q9Y3P4 386 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 SOX21Q9Y651 276 aaPredicted RBP10.3□□□□□ -0.76
COL6A1-205ENST00000492851 IGHV3OR15-7A0A075B7D8 119 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 NKX6-3A6NJ46 265 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 ACOT8O14734 319 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 T-ENOLP0DO92 83 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 MDKP21741 143 aaPredicted RBP10.29□□□□□ -0.76
COL6A1-205ENST00000492851 EEF1B2P24534 225 aaKnown RBP10.29□□□□□ -0.76
COL6A1-205ENST00000492851 DCTDP32321 178 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 MAP2K3P46734 347 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 TGM4P49221 684 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 CDK5Q00535 292 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 OCLNQ16625 522 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 KLHL12Q53G59 568 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 WDR38Q5JTN6 314 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 OLFML2AQ68BL7 652 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 TREML4Q6UXN2 200 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 GDPGP1Q6ZNW5 385 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 KRT77Q7Z794 578 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 LDLRAD3Q86YD5 345 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 ADGRG5Q8IZF4 528 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 IQCF1Q8N6M8 205 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 CANT1Q8WVQ1 401 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 OR5P3Q8WZ94 311 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 CCDC124Q96CT7 223 aaKnown RBP10.29□□□□□ -0.76
COL6A1-205ENST00000492851 RNF170Q96K19 258 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 MROQ9BYG7 248 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 YIPF3Q9GZM5 350 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 TMEM14AQ9Y6G1 99 aa10.29□□□□□ -0.76
COL6A1-205ENST00000492851 BTBD17A6NE02 478 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 ZNF850A8MQ14 1090 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 ZNF254O75437 659 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 ANOS1P23352 680 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 PSMA6P60900 246 aaKnown RBP10.28□□□□□ -0.76
COL6A1-205ENST00000492851 ACTR3P61158 418 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 RPS7P62081 194 aaKnown RBP10.28□□□□□ -0.76
COL6A1-205ENST00000492851 POU4F2Q12837 409 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 PRDX4Q13162 271 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 BLMHQ13867 455 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 DNAL1Q4LDG9 190 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 RUSC1-AS1Q66K80 236 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 KCTD8Q6ZWB6 473 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 KRT74Q7RTS7 529 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 WDR86Q86TI4 376 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 CPOQ8IVL8 374 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 ZDHHC23Q8IYP9 409 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 ZNF671Q8TAW3 534 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 PIGCQ92535 297 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 NRBF2Q96F24 287 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 AMELYQ99218 206 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 PKP2Q99959 881 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 PRRG3Q9BZD7 231 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 CHIAQ9BZP6 476 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 TNFRSF19Q9NS68 423 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 C1RLQ9NZP8 487 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 ZNF319Q9P2F9 582 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 ONECUT1Q9UBC0 465 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 DNAJB9Q9UBS3 223 aa10.28□□□□□ -0.76
COL6A1-205ENST00000492851 A0A0U1RQV5 110 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 ZNF816-ZNF321PA0A0X1KG74 233 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 TMEM269A0A1B0GVZ9 245 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.27□□□□□ -0.77
COL6A1-205ENST00000492851 GYG2O15488 501 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 GSC2O15499 205 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 FBP1P09467 338 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 ALOX5APP20292 161 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 OMGP23515 440 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 IER3P46695 156 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 CSNK2BP67870 215 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 HOXA4Q00056 320 aaPredicted RBP10.27□□□□□ -0.77
COL6A1-205ENST00000492851 CEACAM21Q3KPI0 293 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 ZBTB37Q5TC79 503 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 LCN1P1Q5VSP4 162 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 NCR3LG1Q68D85 454 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 STUMQ69YW2 141 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 ZNF788Q6ZQV5 615 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 VMO1Q7Z5L0 202 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 THAP5Q7Z6K1 395 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 OR5A2Q8NGI9 324 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 C8orf46Q8TAG6 207 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 FAM81AQ8TBF8 368 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 ASB17Q8WXJ9 295 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 RAB3IPQ96QF0 476 aaPredicted RBP10.27□□□□□ -0.77
COL6A1-205ENST00000492851 TEAD3Q99594 435 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 DCTN5Q9BTE1 182 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 SLC25A19Q9HC21 320 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 RASL12Q9NYN1 266 aa10.27□□□□□ -0.77
COL6A1-205ENST00000492851 A0A1W2PPH5 198 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 OR5B21A6NL26 309 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 M0R1W7 72 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 TIMM23O14925 209 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 SELENOFO60613 162 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 MTRF1O75570 445 aaKnown RBP10.26□□□□□ -0.77
COL6A1-205ENST00000492851 ACAA1P09110 424 aaPredicted RBP10.26□□□□□ -0.77
COL6A1-205ENST00000492851 CAV3P56539 151 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 GNG3P63215 75 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 CBX1P83916 185 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms