RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 SYT3Q9BQG1 590 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ABHD6Q9BV23 337 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 C19orf12Q9NSK7 152 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ACOXLQ9NUZ1 547 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 NDRG4Q9ULP0 352 aaKnown RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 HHLA2Q9UM44 414 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 CHST2Q9Y4C5 530 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MUC22E2RYF6 1773 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ANKHD1Q8IWZ3 2542 aaKnown RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF462Q96JM2 2506 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 IGKV1D-42A0A075B6H8 117 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 A0A0A6YYH2 397 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 OR6C6A6NF89 314 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 A6NJ64 397 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ZAR1LA6NP61 321 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 AKR7A2O43488 359 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 FBXO24O75426 580 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 RAF1P04049 648 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 TCRBP04435 133 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 OR2T7P0C7T2 308 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 HTR1FP30939 366 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 FOXF2Q12947 444 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MLLT11Q13015 90 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 KIAA0141Q14154 515 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 PPA1Q15181 289 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 RNF151Q2KHN1 245 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 RNF212Q495C1 297 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SLC22A6Q4U2R8 563 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 TMEM41BQ5BJD5 291 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 HACD4Q5VWC8 232 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 OR2T2Q6IF00 324 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 TMEM108Q6UXF1 575 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF705AQ6ZN79 300 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF709Q8N972 641 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 IL17RDQ8NFM7 739 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 OR2T27Q8NH04 317 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 FAM57AQ8TBR7 257 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 LIPHQ8WWY8 451 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 DVL3Q92997 716 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MALSU1Q96EH3 234 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 WDYHV1Q96HA8 205 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 OR5M11Q96RB7 305 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MBOAT4Q96T53 435 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 NKX6-2Q9C056 277 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 GPR35Q9HC97 309 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 TAS2R5Q9NYW4 299 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 TMEFF2Q9UIK5 374 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 GPR160Q9UJ42 338 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 RCE1Q9Y256 329 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ABCD4O14678 606 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 EFNA2O43921 213 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 CYTIPO60759 359 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 PRSS23O95084 383 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF205O95201 554 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MBP02144 154 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 THY1P04216 161 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ARR3P36575 388 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 LIPAP38571 399 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MRPS10P82664 201 aaKnown RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SFRP5Q5T4F7 317 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 HIST2H3PS2Q5TEC6 136 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 RGS7BPQ6MZT1 257 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MEX3BQ6ZN04 569 aaKnown RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF704Q6ZNC4 412 aaPredicted RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 PRR18Q8N4B5 295 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SUMF2Q8NBJ7 301 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 MDS2Q8NDY4 140 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SLC30A7Q8NEW0 376 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 STEAP2Q8NFT2 490 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 OR52I1Q8NGK6 324 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 GPR148Q8TDV2 347 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SCARB1Q8WTV0 552 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 WNT2BQ93097 391 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 FGGYQ96C11 551 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SULT4A1Q9BR01 284 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 VPS25Q9BRG1 176 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SLC5A7Q9GZV3 580 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ACKR4Q9NPB9 350 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 BABAM2Q9NXR7 383 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 SLCO1C1Q9NYB5 712 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 OR52A1Q9UKL2 312 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 PRELID3BQ9Y3B1 194 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF175Q9Y473 711 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 PUS1Q9Y606 427 aaKnown RBP eCLIP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 DSPPQ9NZW4 1301 aa3.95□□□□□ -1.78
TRA2B-215ENST00000492417 FLNBO75369 2602 aaKnown RBP3.95□□□□□ -1.78
TRA2B-215ENST00000492417 LRRK2Q5S007 2527 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 A0A1B0GUH1 482 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 MS4A18H0YCH9 400 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 DCTN6O00399 190 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 MPIG6BO95866 241 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SCGB1D1O95968 90 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 CD3EP07766 207 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 COX6B1P14854 86 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF44P15621 663 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 RPS4Y1P22090 263 aaKnown RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 HLA-DMAP28067 261 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 MPGP29372 298 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 GNRHRP30968 328 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 PTGER4P35408 488 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms