RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 SEMA6DQ8NFY4 1073 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 C22orf15Q8WYQ4 148 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 OR5P3Q8WZ94 311 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 SEH1LQ96EE3 360 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 SLC6A7Q99884 636 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 RTL8AQ9BWD3 113 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 TLNRD1Q9H1K6 362 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 ORC6Q9Y5N6 252 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 STAB1Q9NY15 2570 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 LOC110117498-PIK3R3F6TDL0 507 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 ADAM20O43506 726 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 MAP2K3P46734 347 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 PAX8Q06710 450 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 SCGB2A2Q13296 93 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 ARMCX4Q5H9R4 360 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 KLF17Q5JT82 389 aaPredicted RBP20.54■□□□□ 0.88
UPF3A-209ENST00000492270 TEX36Q5VZQ5 186 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 ZDHHC23Q8IYP9 409 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 RAB40AQ8WXH6 277 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 RPL3LQ92901 407 aaKnown RBP20.54■□□□□ 0.88
UPF3A-209ENST00000492270 TECTBQ96PL2 329 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 MRI1Q9BV20 369 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 RNPEPL1Q9HAU8 725 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 SMURF1Q9HCE7 757 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 S100A14Q9HCY8 104 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 R4GMQ9 66 aa20.54■□□□□ 0.88
UPF3A-209ENST00000492270 TRAV38-1A0A0B4J264 116 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 ZNF816-ZNF321PA0A0X1KG74 233 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 A0A1W2PQL4 384 aaPredicted RBP20.53■□□□□ 0.88
UPF3A-209ENST00000492270 C22orf46C9J442 243 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 E9PQ18 207 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.53■□□□□ 0.88
UPF3A-209ENST00000492270 FCN3O75636 299 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 EGR3Q06889 387 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 KCNJ8Q15842 424 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 CEP78Q5JTW2 689 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 KCTD8Q6ZWB6 473 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 RNF170Q96K19 258 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 HRASLS5Q96KN8 279 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 MBOAT4Q96T53 435 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 RASSF4Q9H2L5 321 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 IMPAD1Q9NX62 359 aa20.53■□□□□ 0.88
UPF3A-209ENST00000492270 RPP14O95059 124 aaKnown RBP20.52■□□□□ 0.88
UPF3A-209ENST00000492270 FAHP16930 419 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 BCL2L15Q5TBC7 163 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 BTNL3Q6UXE8 466 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 YIPF7Q8N8F6 280 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 SCCPDHQ8NBX0 429 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 OR10H4Q8NGA5 316 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 ZNF418Q8TF45 676 aaPredicted RBP20.52■□□□□ 0.88
UPF3A-209ENST00000492270 RAB3IPQ96QF0 476 aaPredicted RBP20.52■□□□□ 0.88
UPF3A-209ENST00000492270 NUDT16L1Q9BRJ7 211 aaKnown RBP20.52■□□□□ 0.88
UPF3A-209ENST00000492270 MOB1AQ9H8S9 216 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 ABCB9Q9NP78 766 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 TRIM36Q9NQ86 728 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 OR52A1Q9UKL2 312 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 PIGLQ9Y2B2 252 aa20.52■□□□□ 0.88
UPF3A-209ENST00000492270 A0A1B0GW55 424 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 OR2T7P0C7T2 308 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 DUX4L2P0CJ85 424 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 DUX4L3P0CJ86 424 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 DUX4L4P0CJ87 422 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 DUX4L5P0CJ88 424 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 DUX4L6P0CJ89 424 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 DUX4L7P0CJ90 424 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 GPM6AP51674 278 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 GMFBP60983 142 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 DUX4L9Q6RFH8 374 aaPredicted RBP20.51■□□□□ 0.87
UPF3A-209ENST00000492270 KRT74Q7RTS7 529 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 ELMOD2Q8IZ81 293 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 OR2T27Q8NH04 317 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 SLC29A1Q99808 456 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 ERVK-18Q9QC07 812 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 DUX4Q9UBX2 424 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 AASSQ9UDR5 926 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 SLC22A13Q9Y226 551 aa20.51■□□□□ 0.87
UPF3A-209ENST00000492270 KIR2DS1A0A191URI9 304 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 TMEM210A6NLX4 147 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 SRRM5B3KS81 715 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 ENTPD6O75354 484 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 KRT8P05787 483 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 ZNF684Q5T5D7 378 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 THAP5Q7Z6K1 395 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 C10orf67Q8IYJ2 551 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 PQLC1Q8N2U9 271 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 FGFRL1Q8N441 504 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 BPIFB2Q8N4F0 458 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 RFKQ969G6 155 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 WDR13Q9H1Z4 485 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 SNX5Q9Y5X3 404 aa20.5■□□□□ 0.87
UPF3A-209ENST00000492270 IGHV3OR16-10A0A075B7F0 116 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 A0A0A6YYJ9 748 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 A0A1B0GTI1 187 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 P2RY10O00398 339 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 NDUFA2O43678 99 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 DHRS3O75911 302 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 IGHV4-38-2P0DP08 117 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 ATP6V1B1P15313 513 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 ATP6V1E1P36543 226 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 CFHR2P36980 270 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms