RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 A0A1W2PPZ6 126 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 C5orf63A6NC05 138 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 MBD3L4A6NDZ8 208 aaPredicted RBP13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 MBD3L3A6NE82 208 aaPredicted RBP13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 MBD3L5A6NJ08 208 aaPredicted RBP13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 WDR1O75083 606 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 TCRBP04435 133 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 FAHP16930 419 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 BTCP35070 178 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 APLNRP35414 380 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 HGFACQ04756 655 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 MRPL49Q13405 166 aaKnown RBP13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 LY6DQ14210 128 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 BTN2A1Q7KYR7 527 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 CSNK2A3Q8NEV1 391 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 STEAP2Q8NFT2 490 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 OR5L1Q8NGL2 311 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 MBD3L2Q8NHZ7 208 aaPredicted RBP13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 AQP3Q92482 292 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 S100A13Q99584 98 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 C12orf49Q9H741 205 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 PCDHB16Q9NRJ7 776 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 SLC7A11Q9UPY5 501 aa13.11□□□□□ -0.31
TMEM50A-205ENST00000491936 ZNF462Q96JM2 2506 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 RAB27BO00194 218 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 GMDSO60547 372 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 ZNF780AO75290 641 aaPredicted RBP13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 KDM4BO94953 1096 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 NRASP01111 189 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 GSTP1P09211 210 aaKnown RBP13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 ANOS1P23352 680 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 FUT6P51993 359 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 UBE2NP61088 152 aaKnown RBP13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 ZNF92Q03936 586 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 UNC119Q13432 240 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 PNLIPRP3Q17RR3 467 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 LINC00303Q3SY05 128 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 TBRG1Q3YBR2 411 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 ZNF260Q3ZCT1 412 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 C9orf135Q5VTT2 229 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 BIVMQ86UB2 503 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 C17orf78Q8N4C9 275 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 FTMTQ8N4E7 242 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 TMEM229BQ8NBD8 167 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 OR56B1Q8NGI3 324 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 OR10R2Q8NGX6 335 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 OR56B4Q8NH76 319 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 SEH1LQ96EE3 360 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 C1orf147Q96MC9 270 aaPredicted RBP13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 MOV10Q9HCE1 1003 aaKnown RBP13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 OBP2BQ9NPH6 170 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 KLK11Q9UBX7 282 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 KCNN3Q9UGI6 736 aa13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 HELZ2Q9BYK8 2649 aaKnown RBP13.1□□□□□ -0.31
TMEM50A-205ENST00000491936 NCOA6Q14686 2063 aaPredicted RBP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 C5orf49A4QMS7 147 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 ICMTO60725 284 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 CDC14BO60729 498 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 CST4P01036 141 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 EDN3P14138 238 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 PSMB1P20618 241 aaKnown RBP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 COX5AP20674 150 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 TUBG1P23258 451 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 ACKR3P25106 362 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 GIFP27352 417 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 KIR2DL2P43627 348 aaPredicted RBP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 OR3A4PP47883 348 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 RBP2P50120 134 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 ATP1B3P54709 279 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 FOXG1P55316 489 aaPredicted RBP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 RAB25P57735 213 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 TAS2R19P59542 299 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 P2RY6Q15077 328 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 TATDN3Q17R31 274 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 PLEKHN1Q494U1 663 aaPredicted RBP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 RNASE12Q5GAN4 147 aaKnown RBP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 RTL6Q6ICC9 239 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 ASCL4Q6XD76 172 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 GABRG1Q8N1C3 465 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 FAM89BQ8N5H3 189 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 C9orf106Q8NAJ2 232 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 DRAXINQ8NBI3 349 aaPredicted RBP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 HPS1Q92902 700 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 UPRTQ96BW1 309 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 MRPS24Q96EL2 167 aaKnown RBP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 TM2D1Q9BX74 207 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 LPAR5Q9H1C0 372 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 TUBG2Q9NRH3 451 aa13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 GCN1Q92616 2671 aaKnown RBP13.09□□□□□ -0.31
TMEM50A-205ENST00000491936 FIGNL2A6NMB9 653 aa13.08□□□□□ -0.32
TMEM50A-205ENST00000491936 PRAF2O60831 178 aa13.08□□□□□ -0.32
TMEM50A-205ENST00000491936 CA11O75493 328 aa13.08□□□□□ -0.32
TMEM50A-205ENST00000491936 PDGFAP04085 211 aa13.08□□□□□ -0.32
TMEM50A-205ENST00000491936 AKAIN1P0CW23 69 aa13.08□□□□□ -0.32
TMEM50A-205ENST00000491936 IGHV1-2P23083 117 aa13.08□□□□□ -0.32
TMEM50A-205ENST00000491936 RCVRNP35243 200 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms