RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SFRP5Q5T4F7 317 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 GSG1LQ6UXU4 331 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 Q6ZT83 130 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 TMUB2Q71RG4 321 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 HSD17B13Q7Z5P4 300 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-219ENST00000491747 WDFY1Q8IWB7 410 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF100Q8IYN0 542 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 NPEPL1Q8NDH3 523 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 ASB13Q8WXK3 278 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 SF3B5Q9BWJ5 86 aaKnown RBP8.21□□□□□ -1.1
BRCA1-219ENST00000491747 DUX4Q9UBX2 424 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 NDRG3Q9UGV2 375 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 ADAM18Q9Y3Q7 739 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 TEX15Q9BXT5 2789 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 F5H5P2 479 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 TOR1AO14656 332 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 OR2T1O43869 369 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 MRPL33O75394 65 aaKnown RBP8.2□□□□□ -1.1
BRCA1-219ENST00000491747 FGF2P09038 288 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 NANOS3P60323 173 aaKnown RBP8.2□□□□□ -1.1
BRCA1-219ENST00000491747 PCGF3Q3KNV8 242 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 C5orf46Q6UWT4 87 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 NHLRC1Q6VVB1 395 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 DNM1P46Q6ZS02 220 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 GLB1L2Q8IW92 636 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 PDZD9Q8IXQ8 264 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 ANKHD1Q8IWZ3 2542 aaKnown RBP8.2□□□□□ -1.1
BRCA1-219ENST00000491747 FXYD6-FXYD2A0A087WZ82 144 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 SLC22A23A1A5C7 686 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 OR6C68A6NDL8 312 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 POM121CA8CG34 1229 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 H7C417 338 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 XRCC3O43542 346 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 LYZL6O75951 148 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 GLCEO94923 617 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 LPLP06858 475 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 CSF1P09603 554 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 PTHLHP12272 177 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 HLA-DOBP13765 273 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 PRPS1P60891 318 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF273Q14593 569 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 TSPO2Q5TGU0 170 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 FBXW9Q5XUX1 488 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 H1FNTQ75WM6 255 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-219ENST00000491747 TMEM200AQ86VY9 491 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 EIF4E3Q8N5X7 224 aaKnown RBP8.2□□□□□ -1.1
BRCA1-219ENST00000491747 BVESQ8NE79 360 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 OR2AK2Q8NG84 335 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 OR6S1Q8NH40 331 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 OR5AK2Q8NH90 309 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 TNFAIP8L1Q8WVP5 186 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 RGP1Q92546 391 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-219ENST00000491747 TMEM45BQ96B21 275 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 APH1AQ96BI3 265 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 S100PBPQ96BU1 408 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 NMNAT2Q9BZQ4 307 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 FXYD6Q9H0Q3 95 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 LIME1Q9H400 295 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 SLC7A10Q9NS82 523 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 MTFP1Q9UDX5 166 aa8.2□□□□□ -1.1
BRCA1-219ENST00000491747 ANXA2P2A6NMY6 339 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 DEFB108AA8MXU0 73 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 PSMD9O00233 223 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 RLN1P04808 185 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ANXA2P07355 339 aaKnown RBP8.19□□□□□ -1.1
BRCA1-219ENST00000491747 LOXP28300 417 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-219ENST00000491747 H2BFSP57053 126 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 MPPED2Q15777 294 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF74Q16587 644 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 C11orf88Q6PI97 169 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 AAED1Q7RTV5 226 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 SLC36A1Q7Z2H8 476 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 KRT77Q7Z794 578 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF454Q8N9F8 522 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 OR52B4Q8NGK2 314 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 OR6N1Q8NGY5 312 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ZNRF4Q8WWF5 429 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 OXGR1Q96P68 337 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ALG12Q9BV10 488 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF432O94892 652 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 RPP14O95059 124 aaKnown RBP8.19□□□□□ -1.1
BRCA1-219ENST00000491747 VAMP5O95183 116 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ITGA5P08648 1049 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 VSIG10L2P0DP72 767 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF35P13682 527 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 COX5AP20674 150 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 CRYGSP22914 178 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 MAGEB1P43366 347 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 CLDN17P56750 224 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ALKBH1Q13686 389 aaKnown RBP8.19□□□□□ -1.1
BRCA1-219ENST00000491747 P2RY6Q15077 328 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 ZNF684Q5T5D7 378 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 C9orf135Q5VTT2 229 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 BHLHA15Q7RTS1 189 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-219ENST00000491747 CDC20BQ86Y33 519 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 CDH26Q8IXH8 852 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 C10orf53Q8N6V4 93 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 OR4C16Q8NGL9 310 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 HS3ST6Q96QI5 342 aa8.19□□□□□ -1.1
BRCA1-219ENST00000491747 TMEM138Q9NPI0 162 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms