RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 MPC1Q9Y5U8 109 aa15.1■□□□□ 0.01
COL9A3-214ENST00000490398 R4GMQ9 66 aa15.1■□□□□ 0.01
COL9A3-214ENST00000490398 A0A1B0GTI1 187 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 OOEPA6NGQ2 149 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 C22orf46C9J442 243 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 RPP14O95059 124 aaKnown RBP15.09■□□□□ 0.01
COL9A3-214ENST00000490398 TFF1P04155 84 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 FAHP16930 419 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 EPHA1P21709 976 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 GATA3P23771 443 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 CDC42P60953 191 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 GNB2P62879 340 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 ZNF85Q03923 595 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 EGR3Q06889 387 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 CEP78Q5JTW2 689 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 OR10H4Q8NGA5 316 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 OR8B3Q8NGG8 313 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 C22orf15Q8WYQ4 148 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 RNF166Q96A37 237 aaPredicted RBP15.09■□□□□ 0.01
COL9A3-214ENST00000490398 OR8B2Q96RD0 313 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 MNTQ99583 582 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 MICU1Q9BPX6 476 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 TLNRD1Q9H1K6 362 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 OR5V1Q9UGF6 321 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 OR52A1Q9UKL2 312 aa15.09■□□□□ 0.01
COL9A3-214ENST00000490398 A6NIN4 97 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 LOC110117498-PIK3R3F6TDL0 507 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 H3BSH0 61 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 P2RY10O00398 339 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 AMY2BP19961 511 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 GMFBP60983 142 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 PAX8Q06710 450 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 ZNF829Q3KNS6 432 aaPredicted RBP15.08■□□□□ 0
COL9A3-214ENST00000490398 TEX36Q5VZQ5 186 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 KRT74Q7RTS7 529 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 COMMD2Q86X83 199 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 TMEM158Q8WZ71 300 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 RNF170Q96K19 258 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 RAB3IPQ96QF0 476 aaPredicted RBP15.08■□□□□ 0
COL9A3-214ENST00000490398 WDR13Q9H1Z4 485 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 IMPAD1Q9NX62 359 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 SOX21Q9Y651 276 aaPredicted RBP15.08■□□□□ 0
COL9A3-214ENST00000490398 AUP1Q9Y679 476 aa15.08■□□□□ 0
COL9A3-214ENST00000490398 IGHV2-70DA0A0C4DH43 119 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 ZNF816-ZNF321PA0A0X1KG74 233 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 PHYHO14832 338 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 ADAM20O43506 726 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 TCF21O43680 179 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 BAG2O95816 211 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 OR2T7P0C7T2 308 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 GABRB1P18505 474 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 MAP2K3P46734 347 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 SNRPGP62308 76 aaKnown RBP15.07■□□□□ 0
COL9A3-214ENST00000490398 IL5RAQ01344 420 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 MZT1Q08AG7 82 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 ODF4Q2M2E3 257 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 BCL2L15Q5TBC7 163 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 LIPNQ5VXI9 398 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 KCTD8Q6ZWB6 473 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 ZDHHC23Q8IYP9 409 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 ELMOD2Q8IZ81 293 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 YIPF7Q8N8F6 280 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 SCCPDHQ8NBX0 429 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 SEMA6DQ8NFY4 1073 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 OR14K1Q8NGZ2 314 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 OR2T27Q8NH04 317 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 RORBQ92753 470 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 SLC6A7Q99884 636 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 C9orf16Q9BUW7 83 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 RTL8AQ9BWD3 113 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 RNPEPL1Q9HAU8 725 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 CLN8Q9UBY8 286 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 ZNF391Q9UJN7 358 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 PIGLQ9Y2B2 252 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 ORC6Q9Y5N6 252 aa15.07■□□□□ 0
COL9A3-214ENST00000490398 IGHV3OR16-10A0A075B7F0 116 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 ANXA2P2A6NMY6 339 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 ANKRD65E5RJM6 399 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 J3QRE1 110 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 DLGAP1O14490 977 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 RHBDL1O75783 438 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 KRT8P05787 483 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 GPM6AP51674 278 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 TP53I3Q53FA7 332 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 FAM76BQ5HYJ3 339 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 MOB3CQ70IA8 216 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 CATSPERDQ86XM0 798 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 ENTHD1Q8IYW4 607 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 BCL6BQ8N143 479 aaPredicted RBP15.06■□□□□ 0
COL9A3-214ENST00000490398 NANPQ8TBE9 248 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 TRUB1Q8WWH5 349 aaKnown RBP15.06■□□□□ 0
COL9A3-214ENST00000490398 RAB40AQ8WXH6 277 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 RNFT2Q96EX2 444 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 CCL13Q99616 98 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 C19orf24Q9BVV8 132 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 GMPPBQ9Y5P6 360 aa15.06■□□□□ 0
COL9A3-214ENST00000490398 TRAV38-1A0A0B4J264 116 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 KIR2DS1A0A191URI9 304 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 METTL15A6NJ78 407 aa15.05■□□□□ -0
COL9A3-214ENST00000490398 SRRM5B3KS81 715 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms