RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 C6orf50Q9HD87 102 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 EXOSC4Q9NPD3 245 aaKnown RBP2.34□□□□□ -2.04
UBXN4-208ENST00000490163 ZDHHC4Q9NPG8 344 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 IL1RAPQ9NPH3 570 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 NECAP2Q9NVZ3 263 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 SMCHD1A6NHR9 2005 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 CHD5Q8TDI0 1954 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 ANKRD12Q6UB98 2062 aa2.34□□□□□ -2.04
UBXN4-208ENST00000490163 A0A0B4J2E0 115 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 A0A1W2PP18 115 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 AIPO00170 330 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 BCKDKO14874 412 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 MRPS14O60783 128 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 GADD45GO95257 159 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SERPINA1P01009 418 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CD8AP01732 235 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 STSP08842 583 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 HTR1AP08908 422 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CT45A10P0DMU9 189 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CBR1P16152 277 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SPI1P17947 270 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 GADD45AP24522 165 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 PAX6P26367 422 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 AK4P27144 223 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 RPL22P35268 128 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SPRP35270 261 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ETV6P41212 452 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ACTR1BP42025 376 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CLDN6P56747 220 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 DYNLT1P63172 113 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 GTF2BQ00403 316 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CHRNB3Q05901 458 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 EGFEM1PQ0D2K5 195 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 C5orf64Q2M2E5 130 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CDNFQ49AH0 187 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 RPL13AP3Q6NVV1 102 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF720Q7Z2F6 126 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 HSD17B13Q7Z5P4 300 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM156Q8N614 296 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ACBD4Q8NC06 268 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 OR8J2Q8NGG1 315 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 OR51L1Q8NGJ5 315 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 MAPK15Q8TD08 544 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 MAFIPQ8WZ33 124 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 PRAP1Q96NZ9 151 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SORCS2Q96PQ0 1159 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CMSS1Q9BQ75 279 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 APOL2Q9BQE5 337 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 GINS4Q9BRT9 223 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 HCAR1Q9BXC0 346 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 C1QTNF6Q9BXI9 259 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 METTL9Q9H1A3 318 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 DPEP2Q9H4A9 486 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 REEP4Q9H6H4 257 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 NT5DC2Q9H857 520 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CCDC167Q9P0B6 97 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 PTGDR2Q9Y5Y4 395 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SELENOKQ9Y6D0 94 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 NLRC5Q86WI3 1866 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 A0A1B0GVI7 797 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 BBIP1A8MTZ0 92 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 TSTD3H0UI37 97 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 M0QYV0 167 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 GPR171O14626 319 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 UBDO15205 165 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 MED6O75586 246 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 IFNA10P01566 189 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 MLNP12872 115 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CD1EP15812 388 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ATP5A1P25705 553 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CRABP1P29762 137 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 FMO3P31513 532 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 OMPP47874 163 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 RBP2P50120 134 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ATP1B3P54709 279 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SIGLEC14Q08ET2 396 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 IRF4Q15306 451 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 RBMS2Q15434 407 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 MARCH8Q5T0T0 291 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 DCAF12Q5T6F0 453 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 PTRHD1Q6GMV3 140 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 TIFABQ6ZNK6 161 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 Q6ZT83 130 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 AHSA2Q719I0 299 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 HIPK1Q86Z02 1210 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CBLN2Q8IUK8 224 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 DCUN1D3Q8IWE4 304 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 PDZD9Q8IXQ8 264 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ZFP82Q8N141 532 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CIARTQ8N365 385 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF561Q8N587 486 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF248Q8NDW4 579 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 COQ8AQ8NI60 647 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 FAM45AQ8TCE6 357 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM143Q96AN5 459 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ROPN1LQ96C74 230 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 DNAJC19Q96DA6 116 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ZCCHC4Q9H5U6 513 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 METTL8Q9H825 291 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 C3orf14Q9HBI5 128 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms