RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 BCL6P41182 706 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 NAA10P41227 235 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 RPS20P60866 119 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 RHOAP61586 193 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TRA2BP62995 288 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 BTG2P78543 158 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 COL10A1Q03692 680 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PNRC1Q12796 327 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PRDX4Q13162 271 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM176BQ3YBM2 270 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 C1orf189Q5VU69 101 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 OGFOD3Q6PK18 319 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CHST9Q7L1S5 443 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TMCO2Q7Z6W1 182 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 LINC01551Q86U37 167 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 EXD3Q8N9H8 876 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 BHLHE23Q8NDY6 225 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC26A10Q8NG04 563 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 OR56A1Q8NGH5 318 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 OR5L2Q8NGL0 311 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 OR13C9Q8NGT0 318 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PPP1R35Q8TAP8 253 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 AQP3Q92482 292 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TNFRSF14Q92956 283 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PTX4Q96A99 478 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ZG16BQ96DA0 208 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 BPIFA2Q96DR5 249 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 NUDT11Q96G61 164 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 C16orf58Q96GQ5 468 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 BOD1Q96IK1 185 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC35E1Q96K37 410 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 OR10C1Q96KK4 312 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 Q96M85 177 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 LYSMD1Q96S90 227 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ALKBH7Q9BT30 221 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ELOVL1Q9BW60 279 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TRIM2Q9C040 744 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CTDSP1Q9GZU7 261 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PARP12Q9H0J9 701 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 MRPL18Q9H0U6 180 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 GLIPR2Q9H4G4 154 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 MTHFD2LQ9H903 347 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 APOBEC3BQ9UH17 382 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 KLK13Q9UKR3 277 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 GPR132Q9UNW8 380 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 YIPF1Q9Y548 306 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CLDN16Q9Y5I7 305 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TTC3P53804 2025 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM212A6NML5 194 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CEACAM18A8MTB9 384 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 H0YL77 283 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PLPP1O14494 284 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF264O43296 627 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 UPK3AO75631 287 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CNMDO75829 334 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 KAT7O95251 611 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 LYPD3O95274 346 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TOMM40O96008 361 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 HMGN2P05204 90 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM87AP0C7U9 286 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM225BP0DP42 221 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 IRF1P10914 325 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 FUT1P19526 365 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 RPS4Y1P22090 263 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 FPR2P25090 351 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 WNT5AP41221 380 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ALDH3B1P43353 468 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 P2RY1P47900 373 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 NOVA1P51513 510 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PRKAG1P54619 331 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ELLP55199 621 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 S100A10P60903 97 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 RND3P61587 244 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 VAMP2P63027 116 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 HIST1H3AP68431 136 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 SMAD3P84022 425 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ARF5P84085 180 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PSG6Q00889 435 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 SRSF2Q01130 221 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PMPCAQ10713 525 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 FOXF1Q12946 379 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 RUNX2Q13950 521 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TAF9Q16594 264 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 RNF151Q2KHN1 245 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF506Q5JVG8 444 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 GPR157Q5UAW9 335 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 IGF2-ASQ6U949 168 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CLEC18BQ6UXF7 455 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF836Q6ZNA1 936 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 GRINAQ7Z429 371 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM220AQ7Z4H9 259 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TGIF2LYQ8IUE0 185 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM219AQ8IW50 185 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 LYG1Q8N1E2 194 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TTC9BQ8N6N2 239 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 COX18Q8N8Q8 333 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM104Q8NE00 496 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 KLHDC9Q8NEP7 349 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 OR52E2Q8NGJ4 325 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms