RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 RPS2P15880 293 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 H2AFXP16104 143 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 SELEP16581 610 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 RHCEP18577 417 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 GGT2P36268 569 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 MDH1P40925 334 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 PITPNBP48739 271 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 GSK3BP49841 420 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 RPS6KA3P51812 740 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 TIRAPP58753 221 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 KRTAP10-3P60369 221 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 KRTAP10-11P60412 298 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 FGF12P61328 243 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 GNB2P62879 340 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 GK2Q14410 553 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 MPPED2Q15777 294 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 MEP1BQ16820 701 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 RFX4Q33E94 735 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 TMEM65Q6PI78 240 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 CORO6Q6QEF8 472 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 BRD3OSQ6XYD6 125 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 HACD2Q6Y1H2 254 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 DCDC5Q6ZRR9 648 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 RRM2BQ7LG56 351 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 C1orf87Q8N0U7 546 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 SLC26A10Q8NG04 563 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 OR8B3Q8NGG8 313 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 OR8B2Q96RD0 313 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 DDOQ99489 341 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 CITED1Q99966 193 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 DCAF13Q9NV06 445 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 FGFR1OP2Q9NVK5 253 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 C1RLQ9NZP8 487 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 PDP1Q9P0J1 537 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 ARMCX1Q9P291 453 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 ABCD2Q9UBJ2 740 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 MGAT4CQ9UBM8 478 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 CTSZQ9UBR2 303 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 CYB5R1Q9UHQ9 305 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 CAPN7Q9Y6W3 813 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 TANC2Q9HCD6 1990 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 TRAV40A0A0B4J280 105 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 TRBV4-1A0A0J9YWV2 114 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 IGHV3-64DA0A0J9YX35 117 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 CENPVL3A0A0U1RRI6 287 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 LRRC30A6NM36 301 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNF879B4DU55 563 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 P2RY10O00398 339 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 SPRY2O43597 315 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 IDH3BO43837 385 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNF682O95780 498 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 LHBP01229 141 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 SEMG1P04279 462 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 LIPFP07098 398 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 MELTFP08582 738 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 COX4I1P13073 169 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 ANOS1P23352 680 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 OMGP23515 440 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 OTX1P32242 354 aaPredicted RBP5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 CFHR2P36980 270 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 NPY4RP50391 375 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 SLC7A2P52569 658 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 RPL15P61313 204 aaKnown RBP5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 TRAP1Q12931 704 aaKnown RBP5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 ECH1Q13011 328 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 C4orf46Q504U0 113 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 OLFML2AQ68BL7 652 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 SMARCD3Q6STE5 483 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 CFAP77Q6ZQR2 320 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 CYP4Z1Q86W10 505 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 KIR3DL3Q8N743 410 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 FAM86B1Q8N7N1 296 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 BHLHE23Q8NDY6 225 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 PRSS3P2Q8NHM4 247 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 RSRC1Q96IZ7 334 aaKnown RBP5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 FAM71F1Q96KD3 344 aaPredicted RBP5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 TBX15Q96SF7 602 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 NMNAT3Q96T66 252 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 HCAR1Q9BXC0 346 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 CHIAQ9BZP6 476 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 NDEL1Q9GZM8 345 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 SIRPDQ9H106 197 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 RERGLQ9H628 205 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 CCDC134Q9H6E4 229 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 WDR76Q9H967 626 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 EFCAB1Q9HAE3 211 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 BEX1Q9HBH7 125 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 TRIM36Q9NQ86 728 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 MRPL22Q9NWU5 206 aaKnown RBP5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 CLN8Q9UBY8 286 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 RPS6KA6Q9UK32 745 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 TMCC3Q9ULS5 477 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 POMT1Q9Y6A1 747 aa5.24□□□□□ -1.57
PRPF40A-210ENST00000489741 CLPSL1A2RUU4 121 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 C5orf63A6NC05 138 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 OR6C68A6NDL8 312 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 CD300LBA8K4G0 201 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 F5H5K5 113 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 LGALS8O00214 317 aa5.23□□□□□ -1.57
PRPF40A-210ENST00000489741 NDUFAB1O14561 156 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms