RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 RANBP1P43487 201 aa18.61■□□□□ 0.57
SMC4-221ENST00000489573 METAP1DQ6UB28 335 aaPredicted RBP18.61■□□□□ 0.57
SMC4-221ENST00000489573 MOB3CQ70IA8 216 aa18.61■□□□□ 0.57
SMC4-221ENST00000489573 C1orf174Q8IYL3 243 aa18.61■□□□□ 0.57
SMC4-221ENST00000489573 CMBLQ96DG6 245 aa18.61■□□□□ 0.57
SMC4-221ENST00000489573 SLC25A38Q96DW6 304 aa18.61■□□□□ 0.57
SMC4-221ENST00000489573 GPER1Q99527 375 aa18.61■□□□□ 0.57
SMC4-221ENST00000489573 ZNF850A8MQ14 1090 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 RAC2P15153 192 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 ARSBP15848 533 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 GNLYP22749 145 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 KISS1Q15726 138 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 C2orf76Q3KRA6 126 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 C4orf17Q53FE4 359 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 PLCXD3Q63HM9 321 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 OR2T2Q6IF00 324 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 RNF144BQ7Z419 303 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 PNLDC1Q8NA58 520 aaKnown RBP18.6■□□□□ 0.57
SMC4-221ENST00000489573 RNASE6Q93091 150 aaKnown RBP18.6■□□□□ 0.57
SMC4-221ENST00000489573 CPNE2Q96FN4 548 aaPredicted RBP18.6■□□□□ 0.57
SMC4-221ENST00000489573 GPR160Q9UJ42 338 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 SLC7A11Q9UPY5 501 aa18.6■□□□□ 0.57
SMC4-221ENST00000489573 ANKRD30BLA7E2S9 258 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 UQCRFS1P47985 274 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 PRDX4Q13162 271 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 AWAT2Q6E213 333 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 WFDC8Q8IUA0 241 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 OR4M1Q8NGD0 313 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 SYNPRQ8TBG9 265 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 CA5BP1Q8WTZ4 195 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 LRRC46Q96FV0 321 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 MARS2Q96GW9 593 aaKnown RBP18.59■□□□□ 0.57
SMC4-221ENST00000489573 ZC3HAV1LQ96H79 300 aaKnown RBP18.59■□□□□ 0.57
SMC4-221ENST00000489573 ABCG5Q9H222 651 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 KCNK15Q9H427 330 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 PPP1R3EQ9H7J1 279 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 PALMDQ9NP74 551 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 CRIM1Q9NZV1 1036 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 MRPS28Q9Y2Q9 187 aaKnown RBP18.59■□□□□ 0.57
SMC4-221ENST00000489573 MYO7BQ6PIF6 2116 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 TMEM272A0A1B0GTI8 110 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 NKX2-6A6NCS4 301 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 BPNT1O95861 308 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 THBDP07204 575 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 SELEP16581 610 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 PTBP1P26599 531 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMC4-221ENST00000489573 OR3A4PP47883 348 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 ART1P52961 327 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 ZNF79Q15937 498 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 IGFBP7Q16270 282 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 C16orf87Q6PH81 154 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 CRIP3Q6Q6R5 217 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 LHFPL2Q6ZUX7 228 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 ANGPTL5Q86XS5 388 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 ZDHHC23Q8IYP9 409 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 CMTM4Q8IZR5 234 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 BHLHE23Q8NDY6 225 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 KLF14Q8TD94 323 aaPredicted RBP18.59■□□□□ 0.57
SMC4-221ENST00000489573 RAB40AQ8WXH6 277 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 HAVCR1Q96D42 359 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 BORCS8Q96FH0 119 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 SOSTQ9BQB4 213 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 RHBDL2Q9NX52 303 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 SPEF1Q9Y4P9 236 aa18.59■□□□□ 0.57
SMC4-221ENST00000489573 FAM230AA0A1W2PPH8 454 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 COL6A6A6NMZ7 2263 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 CD40P25942 277 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 FUT6P51993 359 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 MTCP1P56278 107 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 MADCAM1Q13477 382 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 IL18Q14116 193 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 XKRXQ6PP77 449 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 TMEM108Q6UXF1 575 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 RFT1Q96AA3 541 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 SRRQ9GZT4 340 aa18.58■□□□□ 0.56
SMC4-221ENST00000489573 LDLRAD4O15165 306 aa18.57■□□□□ 0.56
SMC4-221ENST00000489573 MPV17P39210 176 aa18.57■□□□□ 0.56
SMC4-221ENST00000489573 RBP2P50120 134 aa18.57■□□□□ 0.56
SMC4-221ENST00000489573 PLA2G7Q13093 441 aa18.57■□□□□ 0.56
SMC4-221ENST00000489573 SNTB2Q13425 540 aaKnown RBP18.57■□□□□ 0.56
SMC4-221ENST00000489573 WFIKKN1Q96NZ8 548 aa18.57■□□□□ 0.56
SMC4-221ENST00000489573 KCNJ16Q9NPI9 418 aa18.57■□□□□ 0.56
SMC4-221ENST00000489573 MRPL15Q9P015 296 aaKnown RBP18.57■□□□□ 0.56
SMC4-221ENST00000489573 MPC1Q9Y5U8 109 aa18.57■□□□□ 0.56
SMC4-221ENST00000489573 KALRNO60229 2985 aa18.57■□□□□ 0.56
SMC4-221ENST00000489573 IQCF6A8MYZ5 107 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 PTAFRP25105 342 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 ATP1B3P54709 279 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 PSG7Q13046 419 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 ZNF718Q3SXZ3 478 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 MBNL2Q5VZF2 373 aaKnown RBP18.56■□□□□ 0.56
SMC4-221ENST00000489573 GLIPR1L1Q6UWM5 242 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 BAIAP2L2Q6UXY1 529 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 TNFAIP8L1Q8WVP5 186 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 PTX4Q96A99 478 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 S100A16Q96FQ6 103 aaKnown RBP18.56■□□□□ 0.56
SMC4-221ENST00000489573 CCDC32Q9BV29 185 aa18.56■□□□□ 0.56
SMC4-221ENST00000489573 IGKV1-27A0A075B6S5 117 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 ATP6V1G2-DDX39BF2Z307 99 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 LILRA1O75019 489 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms