RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 OR4C3Q8NH37 302 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 TERTO14746 1132 aaKnown RBP15.8■□□□□ 0.12
NPHP4-209ENST00000489180 MBP02144 154 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 KRTDAPP60985 99 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 PPP1R1AQ13522 171 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 IL10RAQ13651 578 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 OR2W3Q7Z3T1 314 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 ADGRG3Q86Y34 549 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 FBXL14Q8N1E6 418 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 S1PR3Q99500 378 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 KCNK15Q9H427 330 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 OR5V1Q9UGF6 321 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 KLF13Q9Y2Y9 288 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-209ENST00000489180 ECM29Q5VYK3 1845 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 SERPINE3A8MV23 424 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 PHOX2AO14813 284 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 ABCD3P28288 659 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 THBS4P35443 961 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 CD96P40200 585 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 FUT6P51993 359 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 SLC37A1P57057 533 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 ZNF429Q86V71 674 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 EXTL1Q92935 676 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 COMMD5Q9GZQ3 224 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 ZDHHC11Q9H8X9 412 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 EXOGQ9Y2C4 368 aaKnown RBP15.8■□□□□ 0.12
NPHP4-209ENST00000489180 ZNF835Q9Y2P0 537 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 MEX3AA1L020 520 aaKnown RBP15.79■□□□□ 0.12
NPHP4-209ENST00000489180 GSG1Q2KHT4 349 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 LINC01555Q8NAE3 123 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 ZNF586Q9NXT0 402 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 DNAJB12Q9NXW2 375 aaKnown RBP15.79■□□□□ 0.12
NPHP4-209ENST00000489180 FABP1P07148 127 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 MYBPHQ13203 477 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 BHLHA9Q7RTU4 235 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 SLC24A4Q8NFF2 622 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 CORO2AQ92828 525 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 ADGRG7Q96K78 797 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 NARFLQ9H6Q4 476 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 GPR31O00270 319 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 S100A8P05109 93 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 RPS23P62266 143 aaKnown RBP15.79■□□□□ 0.12
NPHP4-209ENST00000489180 COMMD1Q8N668 190 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 OR10V1Q8NGI7 309 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 TSPAN32Q96QS1 320 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 CTSVO60911 334 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 PAX6P26367 422 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 GUK1Q16774 197 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 EID2BQ96D98 161 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 TAAR6Q96RI8 345 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 HDGFL3Q9Y3E1 203 aa15.79■□□□□ 0.12
NPHP4-209ENST00000489180 CCL7P80098 99 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 Q6ZS52 159 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 WDFY2Q96P53 400 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 PHF7Q9BWX1 381 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-209ENST00000489180 BARX1Q9HBU1 254 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-209ENST00000489180 CCDC187A0A096LP49 1063 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 RER1O15258 196 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 ADH4P08319 380 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 ZNF17P17021 662 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 FPR2P25090 351 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 PLA1AQ53H76 456 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 ASB13Q8WXK3 278 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 TMEM18Q96B42 140 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 NRTNQ99748 197 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 PRRX2Q99811 253 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 SUMO1P63165 101 aaKnown RBP15.78■□□□□ 0.12
NPHP4-209ENST00000489180 DHRS2Q13268 280 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 LIMS2Q7Z4I7 341 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 ZNRF4Q8WWF5 429 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 CTAG2O75638 210 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 ERHP84090 104 aaKnown RBP15.78■□□□□ 0.12
NPHP4-209ENST00000489180 ZXDAP98168 799 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 PRDX4Q13162 271 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 OR2V1Q8NHB1 315 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 SPACA9Q96E40 222 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-209ENST00000489180 SPTY2D1-AS1A0A0U1RR47 76 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 NTN1O95631 604 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 ZNF718Q3SXZ3 478 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 THSD4Q6ZMP0 1018 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 TSEN54Q7Z6J9 526 aaKnown RBP15.78■□□□□ 0.12
NPHP4-209ENST00000489180 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-209ENST00000489180 CIB3Q96Q77 187 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-209ENST00000489180 FOXB1Q99853 325 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 GAR1Q9NY12 217 aaKnown RBP15.78■□□□□ 0.12
NPHP4-209ENST00000489180 FAM96BQ9Y3D0 163 aa15.78■□□□□ 0.12
NPHP4-209ENST00000489180 TRPM3Q9HCF6 1732 aaPredicted RBP15.77■□□□□ 0.12
NPHP4-209ENST00000489180 KIF13AQ9H1H9 1805 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 CRYAAP02489 173 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 FABP4P15090 132 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 TP53I13Q8NBR0 393 aaPredicted RBP15.77■□□□□ 0.12
NPHP4-209ENST00000489180 OR1F12Q8NHA8 337 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 TRMT61AQ96FX7 289 aaKnown RBP15.77■□□□□ 0.12
NPHP4-209ENST00000489180 SARGQ9BW04 601 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 CBR3O75828 277 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 IL2RAP01589 272 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 C1QAP02745 245 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 CXCL10P02778 98 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 MRGPREQ86SM8 312 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 GALMQ96C23 342 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms