RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 GYPAP02724 150 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 POLR2IP36954 125 aaKnown RBP14.54□□□□□ -0.08
ATG3-205ENST00000488910 CXCR4P61073 352 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 HOXA4Q00056 320 aaPredicted RBP14.54□□□□□ -0.08
ATG3-205ENST00000488910 EGR3Q06889 387 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 MICBQ29980 383 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 TUSC1Q2TAM9 212 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 WDR82Q6UXN9 313 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 FAM90A1Q86YD7 464 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 OR8J1Q8NGP2 316 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 OR10Z1Q8NGY1 313 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 FAM216AQ8WUB2 273 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 UPRTQ96BW1 309 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 RNF170Q96K19 258 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 TECTBQ96PL2 329 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 PKP2Q99959 881 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 CTSZQ9UBR2 303 aa14.54□□□□□ -0.08
ATG3-205ENST00000488910 NUFIP1Q9UHK0 495 aaKnown RBP14.54□□□□□ -0.08
ATG3-205ENST00000488910 SAC3D1A6NKF1 404 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 PRR32B1ATL7 298 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 CDIPTO14735 213 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 IGLV3-1P01715 115 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 HTR1FP30939 366 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 CSNK2BP67870 215 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 RIPPLY1Q0D2K3 151 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 POU4F2Q12837 409 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 TMED1Q13445 227 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 KPNB1Q14974 876 aaKnown RBP14.53□□□□□ -0.08
ATG3-205ENST00000488910 ZBTB37Q5TC79 503 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 RBMS3Q6XE24 437 aaKnown RBP14.53□□□□□ -0.08
ATG3-205ENST00000488910 ZDHHC23Q8IYP9 409 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 C22orf15Q8WYQ4 148 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 C12orf43Q96C57 262 aaKnown RBP14.53□□□□□ -0.08
ATG3-205ENST00000488910 APOL4Q9BPW4 351 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 RIBC2Q9H4K1 309 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 MOB1AQ9H8S9 216 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 ZNF69Q9UC07 566 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 ANK2Q01484 3957 aa14.53□□□□□ -0.08
ATG3-205ENST00000488910 SRRM5B3KS81 715 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 MTRF1O75570 445 aaKnown RBP14.52□□□□□ -0.09
ATG3-205ENST00000488910 ECDO95905 644 aaPredicted RBP14.52□□□□□ -0.09
ATG3-205ENST00000488910 OR2T7P0C7T2 308 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 EGR1P18146 543 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 CDC42P60953 191 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 CEACAM21Q3KPI0 293 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 KCTD8Q6ZWB6 473 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 DOK3Q7L591 496 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 THAP5Q7Z6K1 395 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 COMMD2Q86X83 199 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.52□□□□□ -0.09
ATG3-205ENST00000488910 OR51G2Q8NGK0 314 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 OR2T27Q8NH04 317 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 OR51E1Q8TCB6 317 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 TRUB1Q8WWH5 349 aaKnown RBP14.52□□□□□ -0.09
ATG3-205ENST00000488910 RFKQ969G6 155 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 MS4A7Q9GZW8 240 aaPredicted RBP14.52□□□□□ -0.09
ATG3-205ENST00000488910 GPR84Q9NQS5 396 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 ORC6Q9Y5N6 252 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 R4GMQ9 66 aa14.52□□□□□ -0.09
ATG3-205ENST00000488910 C22orf46C9J442 243 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 LOC110117498-PIK3R3F6TDL0 507 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 EBAG9O00559 213 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 TMPRSS2O15393 492 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 SRSF10O75494 262 aaKnown RBP14.51□□□□□ -0.09
ATG3-205ENST00000488910 BPIFB3P59826 476 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 GNG3P63215 75 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 ATPAF1Q5TC12 328 aaPredicted RBP14.51□□□□□ -0.09
ATG3-205ENST00000488910 C9orf139Q6ZV77 190 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 SLC36A1Q7Z2H8 476 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 PNLDC1Q8NA58 520 aaKnown RBP14.51□□□□□ -0.09
ATG3-205ENST00000488910 SCCPDHQ8NBX0 429 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 OR5A2Q8NGI9 324 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 HPSE2Q8WWQ2 592 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 RPL3LQ92901 407 aaKnown RBP14.51□□□□□ -0.09
ATG3-205ENST00000488910 FAM71F1Q96KD3 344 aaPredicted RBP14.51□□□□□ -0.09
ATG3-205ENST00000488910 TTTY10Q9BZA0 68 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 USE1Q9NZ43 259 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 MRM2Q9UI43 246 aaKnown RBP14.51□□□□□ -0.09
ATG3-205ENST00000488910 SNX5Q9Y5X3 404 aa14.51□□□□□ -0.09
ATG3-205ENST00000488910 IGHV3OR15-7A0A075B7D8 119 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 H3BNX3 289 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.5□□□□□ -0.09
ATG3-205ENST00000488910 DVL1O14640 695 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 DHRS3O75911 302 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 PLATP00750 562 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 TTRP02766 147 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 ALPLP05186 524 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 KRT8P05787 483 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 ATP6V1E1P36543 226 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 MTNR1AP48039 350 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 GPM6AP51674 278 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 FGF12P61328 243 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 MFGE8Q08431 387 aaPredicted RBP14.5□□□□□ -0.09
ATG3-205ENST00000488910 BCL2L15Q5TBC7 163 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 ELMOD2Q8IZ81 293 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 SIGLECL1Q8N7X8 197 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 ZDHHC22Q8N966 263 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 PPP1R14AQ96A00 147 aa14.5□□□□□ -0.09
ATG3-205ENST00000488910 FGF23Q9GZV9 251 aaPredicted RBP14.5□□□□□ -0.09
ATG3-205ENST00000488910 DNTTIP1Q9H147 329 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms