RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 IDH3GP51553 393 aaPredicted RBP16.74■□□□□ 0.27
CCM2-216ENST00000488727 CLDN12P56749 244 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 MFGE8Q08431 387 aaPredicted RBP16.74■□□□□ 0.27
CCM2-216ENST00000488727 ZNF787Q6DD87 383 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 DPPA2Q7Z7J5 298 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 ZNF584Q8IVC4 421 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 IZUMO1Q8IYV9 350 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 ZNF295-AS1Q8N0V1 137 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 FAM169BQ8N8A8 192 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 ST7LQ8TDW4 575 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 CAPSLQ8WWF8 208 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 PLPPR2Q96GM1 343 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 MS4A3Q96HJ5 214 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 AUNIPQ9H7T9 357 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 HEATR1Q9H583 2144 aaKnown RBP16.74■□□□□ 0.27
CCM2-216ENST00000488727 ABCA4P78363 2273 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 CELSR2Q9HCU4 2923 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 FAM172BPA6NC97 362 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 A6NNC1 897 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 ZNF14P17017 642 aaPredicted RBP16.73■□□□□ 0.27
CCM2-216ENST00000488727 ARR3P36575 388 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 PSG4Q00888 419 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 CD83Q01151 205 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 BSPH1Q075Z2 132 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 BEX5Q5H9J7 111 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 NCMAPQ5T1S8 102 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 CORO6Q6QEF8 472 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 DNM1P46Q6ZS02 220 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 PRSS45Q7RTY3 260 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 LINC00346Q8IVM7 164 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 OR10H5Q8NGA6 315 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 HS3ST6Q96QI5 342 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 OR2H1Q9GZK4 316 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 NGBQ9NPG2 151 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 ING3Q9NXR8 418 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 SLC22A13Q9Y226 551 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 POLR1DQ9Y2S0 133 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 RTTNQ86VV8 2226 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 NAP1L6A6NFF2 107 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 MAS1P04201 325 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 CECR9P0C854 216 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 CD37P11049 281 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 AP3S2P59780 193 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 RNASE12Q5GAN4 147 aaKnown RBP16.73■□□□□ 0.27
CCM2-216ENST00000488727 PABPC1L2AQ5JQF8 200 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 BTN2A1Q7KYR7 527 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 AKR7LQ8NHP1 331 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 PIK3IP1Q96FE7 263 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 WNT5BQ9H1J7 359 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 NIPAL2Q9H841 368 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 CYB5R1Q9UHQ9 305 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 TIMM10BQ9Y5J6 103 aa16.73■□□□□ 0.27
CCM2-216ENST00000488727 FAM221AA4D161 298 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 RER1O15258 196 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 ISG15P05161 165 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 ACHEP22303 614 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 CD40P25942 277 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 PCBD1P61457 104 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 MRPS15P82914 257 aaKnown RBP16.72■□□□□ 0.27
CCM2-216ENST00000488727 SPOCK1Q08629 439 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 CDK10Q15131 360 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 TMEM69Q5SWH9 247 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 TMEM53Q6P2H8 277 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 TMEM108Q6UXF1 575 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 CPEB3Q8NE35 698 aaKnown RBP16.72■□□□□ 0.27
CCM2-216ENST00000488727 DNAAF1Q8NEP3 725 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 CACNG6Q9BXT2 260 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 GHITMQ9H3K2 345 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 NUDT15Q9NV35 164 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 MCUBQ9NWR8 336 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 DHDHQ9UQ10 334 aa16.72■□□□□ 0.27
CCM2-216ENST00000488727 C1QBP02746 253 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 SERPINA5P05154 406 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 IGFBP3P17936 291 aaPredicted RBP16.71■□□□□ 0.27
CCM2-216ENST00000488727 CDK2P24941 298 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 GIFP27352 417 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 HIST1H3AP68431 136 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 SNTB2Q13425 540 aaKnown RBP16.71■□□□□ 0.27
CCM2-216ENST00000488727 ODF4Q2M2E3 257 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 C3orf36Q3SXR2 165 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 HIST2H3PS2Q5TEC6 136 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 FAM166AQ6J272 317 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 ZNF774Q6NX45 483 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 HIST2H3AQ71DI3 136 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 DCXRQ7Z4W1 244 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 OR52I2Q8NH67 350 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 RNF133Q8WVZ7 376 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 FCAMRQ8WWV6 532 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 MARVELD3Q96A59 401 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 ESRP2Q9H6T0 727 aaKnown RBP16.71■□□□□ 0.27
CCM2-216ENST00000488727 G6PC2Q9NQR9 355 aa16.71■□□□□ 0.27
CCM2-216ENST00000488727 A0A0A6YYJ9 748 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 A0A1W2PPR1 153 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 SLC17A2O00624 439 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 CD2P06729 351 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 PTAFRP25105 342 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 ERP29P30040 261 aaKnown RBP16.7■□□□□ 0.26
CCM2-216ENST00000488727 DCTDP32321 178 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 TAS2R20P59543 309 aa16.7■□□□□ 0.26
CCM2-216ENST00000488727 SCRN3Q0VDG4 424 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms