RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 L7N2F9 121 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 LGALS8O00214 317 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 GOSR2O14653 212 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 NDUFB6O95139 128 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 ECDO95905 644 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-230ENST00000488543 OTX1P32242 354 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-230ENST00000488543 POU3F4P49335 361 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 UCNP55089 124 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 CLLU1Q5K131 121 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 OLFML2AQ68BL7 652 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 OR10K2Q6IF99 312 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 MYO7BQ6PIF6 2116 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 NAA40Q86UY6 237 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 LYPD6Q86Y78 171 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 LILRB2Q8N423 598 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 ZNF283Q8N7M2 679 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 OR1J2Q8NGS2 313 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 OR51E1Q8TCB6 317 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 ADAT3Q96EY9 351 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-230ENST00000488543 DOCK7Q96N67 2140 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 MRI1Q9BV20 369 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 LINC00470Q9BZP3 86 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 FXYD6Q9H0Q3 95 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 SLCO5A1Q9H2Y9 848 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 CALHM2Q9HA72 323 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 CGGBP1Q9UFW8 167 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-230ENST00000488543 RHBDD3Q9Y3P4 386 aa10.62□□□□□ -0.71
HDAC6-230ENST00000488543 PLSCR5A0PG75 271 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 ZNF724A8MTY0 619 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 SYT7O43581 403 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 CREBL2O60519 120 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-230ENST00000488543 IGLV3-1P01715 115 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 GTF2F2P13984 249 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 B4GALT1P15291 398 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 CCL1P22362 96 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 BPIFB3P59826 476 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 C21orf62-AS1Q17RA5 79 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 ZNF626Q68DY1 528 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 FAM57BQ71RH2 274 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 IQCF2Q8IXL9 164 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 MUC20Q8N307 709 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-230ENST00000488543 Q8NA96 180 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 SLC25A28Q96A46 364 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 FGGYQ96C11 551 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 LINC00052Q96N35 136 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 FOXB1Q99853 325 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 SLC7A10Q9NS82 523 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 EMC3Q9P0I2 261 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 MAB21L2Q9Y586 359 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 ETV7Q9Y603 341 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 ACACBO00763 2458 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 TMEM272A0A1B0GTI8 110 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 M0QYG6 137 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 SLC17A2O00624 439 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 MRPL33O75394 65 aaKnown RBP10.61□□□□□ -0.71
HDAC6-230ENST00000488543 CTAG2O75638 210 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 CD3DP04234 171 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 ATF4P18848 351 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-230ENST00000488543 CRYGSP22914 178 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 AP3S2P59780 193 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 SLC22A24Q8N4F4 322 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 CISD2Q8N5K1 135 aaKnown RBP10.61□□□□□ -0.71
HDAC6-230ENST00000488543 FGFBP3Q8TAT2 258 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 CYYR1Q96J86 154 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 CKLFQ9UBR5 152 aa10.61□□□□□ -0.71
HDAC6-230ENST00000488543 SYNGR3O43761 229 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 CSN2P05814 226 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 DBHP09172 617 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 RRASP10301 218 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 RAB35Q15286 201 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 ZNF529Q6P280 563 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 C17orf107Q6ZR85 190 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 GALNT11Q8NCW6 608 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 LYZL4Q96KX0 146 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 TMEM138Q9NPI0 162 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 GPR84Q9NQS5 396 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 SLC17A5Q9NRA2 495 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 PTTG3PQ9NZH4 202 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 KCNN3Q9UGI6 736 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 ZNF230Q9UIE0 474 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-230ENST00000488543 GGT3PA6NGU5 568 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 RBBP9O75884 186 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 PATE4P0C8F1 98 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 ZNF32P17041 273 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 SCAND1P57086 179 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 RAB14P61106 215 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 SPOCK1Q08629 439 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 RAB11BQ15907 218 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 C2orf76Q3KRA6 126 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 KRTAP27-1Q3LI81 207 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 ZNF774Q6NX45 483 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 C3P1Q6ZMU1 363 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 SLC36A1Q7Z2H8 476 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 RTN4RL2Q86UN3 420 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 SKA3Q8IX90 412 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 RAB40AQ8WXH6 277 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 WBP1Q96G27 269 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 GSX2Q9BZM3 304 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 ATG5Q9H1Y0 275 aa10.6□□□□□ -0.71
HDAC6-230ENST00000488543 PLEK2Q9NYT0 353 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms