RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 Q8N976 141 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 FAM83FQ8NEG4 500 aaPredicted RBP2.5□□□□□ -2.01
ITGB1-214ENST00000488427 CCDC148Q8NFR7 591 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 OR10G2Q8NGC3 310 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 OR52H1Q8NGJ2 320 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 OR10G4Q8NGN3 311 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 OR2Y1Q8NGV0 311 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 GEMIN6Q8WXD5 167 aaKnown RBP2.5□□□□□ -2.01
ITGB1-214ENST00000488427 FRZBQ92765 325 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 DTNBP1Q96EV8 351 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 ZNF641Q96N77 438 aaPredicted RBP2.5□□□□□ -2.01
ITGB1-214ENST00000488427 TSSK3Q96PN8 268 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 COPS8Q99627 209 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 SH3GL3Q99963 347 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 OSBPL10Q9BXB5 764 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 CAPS2Q9BXY5 557 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 SLC7A5P2Q9GIP4 190 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 DNTTIP1Q9H147 329 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 YY1AP1Q9H869 796 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 LIN28AQ9H9Z2 209 aaKnown RBP2.5□□□□□ -2.01
ITGB1-214ENST00000488427 SMOXQ9NWM0 555 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 SPATA7Q9P0W8 599 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 PACSIN2Q9UNF0 486 aaPredicted RBP2.5□□□□□ -2.01
ITGB1-214ENST00000488427 KCNIP3Q9Y2W7 256 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 SRRM2Q9UQ35 2752 aaKnown RBP2.49□□□□□ -2.01
ITGB1-214ENST00000488427 GOLGA6L7A0A1B0GV03 622 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 FOXH1O75593 365 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 VAMP5O95183 116 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 SLC25A14O95258 325 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-214ENST00000488427 TGM6O95932 706 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 ZNF24P17028 368 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 CNR1P21554 472 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 PAX7P23759 505 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 YAP1P46937 504 aaKnown RBP2.49□□□□□ -2.01
ITGB1-214ENST00000488427 CYB561P49447 251 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 ACOT2P49753 483 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 SUB1P53999 127 aaKnown RBP eCLIP2.49□□□□□ -2.01
ITGB1-214ENST00000488427 LOXL1Q08397 574 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-214ENST00000488427 SCRN3Q0VDG4 424 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 FAM83EQ2M2I3 478 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 TTLL9Q3SXZ7 439 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 LRRC23Q53EV4 343 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-214ENST00000488427 LINC00483Q53H64 154 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 KPRPQ5T749 579 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-214ENST00000488427 LCN12Q6JVE5 192 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 FAM92BQ6ZTR7 304 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 MED12LQ86YW9 2145 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 MREGQ8N565 214 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 RNF182Q8N6D2 247 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 CSGALNACT2Q8N6G5 542 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 MFSD9Q8NBP5 474 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 MUC7Q8TAX7 377 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 DNAJC19Q96DA6 116 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 COQ2Q96H96 371 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
ITGB1-214ENST00000488427 PARP12Q9H0J9 701 aaKnown RBP2.49□□□□□ -2.01
ITGB1-214ENST00000488427 TET2Q6N021 2002 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-214ENST00000488427 A0A096LNT2 108 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 C15orf38-AP3S2A0A0A6YYH1 394 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 IGHV5-51A0A0C4DH38 117 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 IGHV3-66A0A0C4DH42 116 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 A0A1W2PP18 115 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 GABRR3A8MPY1 467 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 KLRC4-KLRK1H3BQV0 150 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 CDC7O00311 574 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 HSD17B6O14756 317 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 CDC40O60508 579 aaKnown RBP eCLIP2.48□□□□□ -2.01
ITGB1-214ENST00000488427 GAPDHP04406 335 aaKnown RBP2.48□□□□□ -2.01
ITGB1-214ENST00000488427 FDFT1P37268 417 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 GSSP48637 474 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 MRPL28Q13084 256 aaKnown RBP2.48□□□□□ -2.01
ITGB1-214ENST00000488427 PDIA2Q13087 525 aaKnown RBP2.48□□□□□ -2.01
ITGB1-214ENST00000488427 LY6G6FQ5SQ64 297 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 OR4F3Q6IEY1 312 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 LYPD2Q6UXB3 125 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 ABHD13Q7L211 337 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 TGIF2LXQ8IUE1 241 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 ARHGAP18Q8N392 663 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 MAGEE2Q8TD90 523 aaPredicted RBP2.48□□□□□ -2.01
ITGB1-214ENST00000488427 ZFP90Q8TF47 636 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 TBC1D31Q96DN5 1066 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 PIK3IP1Q96FE7 263 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 OXGR1Q96P68 337 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 RNF157Q96PX1 679 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 ANGPTL4Q9BY76 406 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 MFFQ9GZY8 342 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 NIPAL2Q9H841 368 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 NTN4Q9HB63 628 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 FANCEQ9HB96 536 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 NOX3Q9HBY0 568 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 CSNK1G1Q9HCP0 422 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 INPP5EQ9NRR6 644 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 GPATCH2LQ9NWQ4 482 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 PDP1Q9P0J1 537 aaPredicted RBP2.48□□□□□ -2.01
ITGB1-214ENST00000488427 CHRNA9Q9UGM1 479 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 HS3ST2Q9Y278 367 aa2.48□□□□□ -2.01
ITGB1-214ENST00000488427 YTHDF2Q9Y5A9 579 aaKnown RBP2.48□□□□□ -2.01
ITGB1-214ENST00000488427 IGLV2-18A0A075B6J9 118 aa2.47□□□□□ -2.01
ITGB1-214ENST00000488427 TRAV40A0A0B4J280 105 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms